Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0032 |
Symbol | |
ID | 5369210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 36221 |
End bp | 37543 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640802375 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_001338910 |
Protein GI | 152994075 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0528554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA TTGAATTATT AACTGCGATT TTATTTGCCT GCATCATAGT GTCGTTTGCC TTAGGCGCAC CCGTTGGTTT GGCTCTGGGC GGTATCGCCA TGGGTATTGG TTACATGACC TGGGGAGATG CTTTATTTAA CGTTATACCG ACGACACTTG AATCTACCCA TTTTAGCTTC ATCCTGCTCG CCATCCCTTT GTATATCTAT ATGGGTCAAT TGCTCACTCG ATCCGGTATT GGCGACGCCA TGTTCAATGC CAGCCAAATG CTCATTGGCC GTGTGCGTGG CTCATTGGCC ATCAGCGTTA TTGTGGTGTG CTCCATGATT GGCGCTATGG TCGGCATTAT TGGTGCTGGC ATCATGACTT CGGGCAGTAT CGCTCTACGT CCAATGTTAG AGCGCGGCTA CGATAAACGC CTTGCACTGG GTGTCATCAT GGCCGGTGGT GGTTTGGGGA TTTTGATTCC ACCGAGCATT CCGATGATCA TGTTTGCCTC GTCTACACAA AACTCAGTAG GGCGCATGTT TATTGGGGCT TTGATTCCCG CACTGATCAC TGTCGTACTG CTTATCGCTT ACGTGGTGAT CTCTTGTAAA TTGAATCCAA AGCGTGCCCC TATGGATGTC GTGCCAGAAG TACAACCAAC ACCAAAAGAG AAATTCTTAA CCGCTCGTGA TGGCTTGTTG TCACTATTAC TGATTGTTGC CGTGCTTGGC AGTATTATCA TGGGTATAGC AACGCCTACC GAGTCTGGGG CCATTGGTGT TGTCGGTGCG ATTGTTTTAG CGATTTTCTT TAAACGTTTT AAACCTCGTA TGGTTCAAAA AGCGGGTATG CAAGCTGCGC TGTTGGTCAG TGTGGCGATG TGGATTATCG TTGGCGCATC CGTGTTCAGT AACTTCCATT TGCTAATGGG CGTACAAAAC ATGGTGGCAG GTTTCACTCA AGACCTTGGC TTACCGCCGA TCGTGGTCAT CATGTTGTTC CAATTGATCA TGCTGTTGCT GGGCTTCATT ATCGATGAAT TCATCATCGT CCTAATGTGT GCACCTATCT TCACACCGAT AGCTGTATCG CTTGGTTATG ACCCAATTTG GTTTGGTATC TTGATGATTC TAAACATTGA AATCGCCGTT CAGACACCGC CTTATGGTTT TGCCTTGTTC TATCTAAAAG GCATCGCGCC ACCAAACATC ACCATGTTGG ATATCTACAA ATCCATTACG CCGTTTGTCT TACTCAAGTT ATTCGTACTC ATTATTGTGA TGATGTTCCC AGAATTAGTA ACTTGGCTAC CAAACCAATT AATGGATGGT TAA
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Protein sequence | MISIELLTAI LFACIIVSFA LGAPVGLALG GIAMGIGYMT WGDALFNVIP TTLESTHFSF ILLAIPLYIY MGQLLTRSGI GDAMFNASQM LIGRVRGSLA ISVIVVCSMI GAMVGIIGAG IMTSGSIALR PMLERGYDKR LALGVIMAGG GLGILIPPSI PMIMFASSTQ NSVGRMFIGA LIPALITVVL LIAYVVISCK LNPKRAPMDV VPEVQPTPKE KFLTARDGLL SLLLIVAVLG SIIMGIATPT ESGAIGVVGA IVLAIFFKRF KPRMVQKAGM QAALLVSVAM WIIVGASVFS NFHLLMGVQN MVAGFTQDLG LPPIVVIMLF QLIMLLLGFI IDEFIIVLMC APIFTPIAVS LGYDPIWFGI LMILNIEIAV QTPPYGFALF YLKGIAPPNI TMLDIYKSIT PFVLLKLFVL IIVMMFPELV TWLPNQLMDG
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