Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5493 |
Symbol | |
ID | 4114361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008147 |
Strand | - |
Start bp | 69570 |
End bp | 72779 |
Gene Length | 3210 bp |
Protein Length | 1069 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638034648 |
Product | helicase-like protein |
Protein accession | YP_642649 |
Protein GI | 108802453 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0695829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTTTG ACCGCGGTCA ACGGGTCCGG GTTCAGGCGC CGGGCGTACC GGAGTTCGCG ACCGTTCGCT TCGCCATTCC TGGCGATTCT GATGGTTCGT GGGACCTGAT CCTGGTCGAT GACGAGGACC GCCGCCACGA GATTAACCTT GCCGCTGGCG ACACCGAGAC GGTGCGCAAG CTCGTCAGCG ACGGGCACGG CGATTCCGCG CGGGTGCTGG CCGCGATGTG GACTCAGTGG ATGGACGCTG CGGCGACCAA CGCGGAGTCC AGCGCGATGG CGTCGATGCC GCTCAAGCCG TACGCCCATC AGACCACCGC GGTGTATGGG GCGATGCTGC CGCAACCTCA GCTGCGGTTT CTGCTGGCTG ATGAACCCGG CACCGGCAAG ACGATCATGG CCGGCCTGTA CCTGCGTGAA ATGCAGCGGC TCGGATTGGT CAAGCGTGCG GTGATCGTGT GCCCCGCCAA CTTGGCCTCG AAGTGGGTTG ATGACTTCTC ACGGCTACTC GGTGGGGGGC TGCGGCAGAT CACCTCGGCG ACGGTGCGCG AGGATGCGCT CAACTCGAAC GACCTGTGGG TGGTGTCGCT GGAATTGGCC GCGGTCAATC CTGCTGTTCA GGACGCGCTG CGCCCCGACA AAGCGGGCTG GGATCTGGTG GTGTTCGACG AGGCGCACCG GCTGACCCCG ACCGCGGCCG GTTTCCATCA GGTGGGTCGG CTCCTGGCGA AGAACACGCC GCGGGCGTTG TTGATGACGG CGACCCCGCA CCGCGGTAAG GAATGGCTGT TTCGGCATCT ACTGCACCTC GTCGACCCCG CCATCTATCC GGATCCCGGC AGCGACCCGA ATGTCGCGCT GTCGGCGCTG CGGCCGGGCC CGATCCACTT CCTGCGCAGG ATGAAGGAGG ATCTGGTCGA TTACGACGGC AAGACCCGGT TGTTCAAGGG TCGGTCCGCC CACAACCACA GCGTTGCCCT CTCCCAGGTC GAGTACGCCT ACTACCAGGC TGCGCTGGAC ATGGTGGAGC AGTTCTTTCC GCAGTCGGCG CAGCCTCTTG CGCGGATGGT GTACGGCAAG CGGGCCGCGT CGAGCTTGTA TGCGCTAGCC GAGACGCTGC GGCGCCGTTC CACCCACATG GGGGAGATGA GCGAAGCCGA GGCGGCGCTG ATCGCCGAAA GCAGTAACGA CGGCGATGAG AGCGAAGTCG ACGAGGCGAA GGTCATCCAC ACCGGATCGA CATCGACACG TGCGGAGCGA ACGGCGATCA AGGGGCTGGT CGATCGGATC GACGCTACCC TCGCCGATGC GGCGTGGCTT CCCTCCAAGT GGCGGCGCCT GACTGAGGAC TGTCTGGCCA AGCACTCGAT CTTGCCGGGC AACGGCGAGC AGGCGGTGGT GTTCACCGAG TACGCCGATT CGGCGCAGTG GATCGCTGAC CGGCTCAAGG CCGAGGGTTA CACCGCCCAG ATGTACTCGG GTCGGCAGAG CAAACCGGAT CGCGATGAAG TCCGAAAAGC GTTCATGCGC GGCGATTTTC AGATAATCGT GACAACCGAT GCGGGCAACG AAGGCATCGA TCTGCAGGCC GCGCACGTGC TGGTGAACTA CGACATCCCA TGGTCACTGG TCCGGCTGGA GCAGCGGATG GGCCGCATCC ACCGGGTCGG TCAGCAGCGC GAGGTCCATC TGTACAACCT GGTCGCCACC GACACTCGTG AAGGCGAGAC CCTGTTGCGA CTGCTCGACA ATTTCGTTAC CGCCGCCAAC GAGCTGCACG GACAAATGTT CGACAGCCTC TCGGCGGTCG CCGAGATCAC CGGCGTGGAC TACGACCGCT GGCTGACCGA TCTGTACGGC AATGACGAGG CCAAGAAGCA GACCGCGATC GACGCCGCTC GGGCGGTGCA GGCCCAGGAA CTGACTCGCG TCGCTCGCCA AGTGCGGGAC AACGAACGCC GGCTGGCCAG TCAGGTCGAC GCCGTGGCCG CGCTGACTCT GCTGCAGCGG GATCTGTTCG CCCGAATCAA CCCCGCGATC GTTGAGGCCT ACCTGGATCG GCTGTCGGCG GCGGGTGTGC TGCAGGCAGC GCCCACCGCT GCGGGACCTG GCTTCCGGCG ACTGTCACTG GCTGGGCAGA GGCTGCCCGA CTCCCTTGGC GGGGGCACTG ATGCCCATAT CGCCACCAGC GGCGAGGCCG TGCGCGCCGC CGAGGAAAGC ATTGACGTCG GTGACACCGT GACCCTGGGG CCAGGGGAGC CGGCGTTCAC CGATTTGATC GCGCTGGCCG ACCGCGCTCT GGCTGAAGAT CTCTACCGGT CGGGCGCGGC CGCTGACCCC AGCAGTCTGA CGCCCTATGA CCTGTATGCC TACGAGGCCA CCATGACCGA GAGCGACGGT AAGCGCGCCA GTGTGTGGGC GACGCTGGTG AAGGTCGATG ACAGCGGCAA CGCGCGCGCG GTGCGGTGGG AGACGCTGGC CAACCTGGTG CCCACGGACA TCGCGGGCAC CGCAGCTCAT CCGGCACGGG AGGGCCGCGC CCAGGAGGTG GCGCGGGAGG TTGCTGATAC CACGGTGAGC GAGCACCGCA AGGTGCGTAC CGATTGGTTC GGCCAGGCGC GGCGGGACTT GAACAACCTT CCGTTGAATC TGACCGAGGG CATTGAGGAC CGCGACACCC GGGTGGCGCT GCGACGCCAG TTTCAGGTCC AGACCTCCGC CCGGATCGCG GAGTTGGAGC GCCTGACCAA TGTGCAGCTG ACCGAGCCGA AGCTGGTGGG TCGCATTCGG GTCCTGGCGG CCGCGGACGC GGGTACGCAG GCCGAGATCG ACGCCGAGAT GGTGTCGATG AGTCACGTCC GTCAGCTGTT GGTCGACGAT GGCTGGGTCG TCGAGGACGT GCACACCGAA GGTCGCGGGT ACGACTTGGA GGCGCGCCGC AACAGCCAGA TCCGCCACAT CGAGGTCAAA GGTGTGCTCG ACAGCGCGGC CAGCAACGGG ATCCGGATGA CCGGCAATGA GGTTCTCATC GCCACCCAGC ACCGCCGCAG CTACTGGCTG TATGTGATCG ACCAGTGCGC CGATGGGGTC GGCCGGTTTT TCGGCGCCTA CGAAGATCCC GCCACCCTGT TTTCCACCGA CATGACCGGG GATGCGATCT TCCGCGTTCC CGGCAGCAGC CTGAAGAACG CGCCGGGAAG CAACCTATGA
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Protein sequence | MTFDRGQRVR VQAPGVPEFA TVRFAIPGDS DGSWDLILVD DEDRRHEINL AAGDTETVRK LVSDGHGDSA RVLAAMWTQW MDAAATNAES SAMASMPLKP YAHQTTAVYG AMLPQPQLRF LLADEPGTGK TIMAGLYLRE MQRLGLVKRA VIVCPANLAS KWVDDFSRLL GGGLRQITSA TVREDALNSN DLWVVSLELA AVNPAVQDAL RPDKAGWDLV VFDEAHRLTP TAAGFHQVGR LLAKNTPRAL LMTATPHRGK EWLFRHLLHL VDPAIYPDPG SDPNVALSAL RPGPIHFLRR MKEDLVDYDG KTRLFKGRSA HNHSVALSQV EYAYYQAALD MVEQFFPQSA QPLARMVYGK RAASSLYALA ETLRRRSTHM GEMSEAEAAL IAESSNDGDE SEVDEAKVIH TGSTSTRAER TAIKGLVDRI DATLADAAWL PSKWRRLTED CLAKHSILPG NGEQAVVFTE YADSAQWIAD RLKAEGYTAQ MYSGRQSKPD RDEVRKAFMR GDFQIIVTTD AGNEGIDLQA AHVLVNYDIP WSLVRLEQRM GRIHRVGQQR EVHLYNLVAT DTREGETLLR LLDNFVTAAN ELHGQMFDSL SAVAEITGVD YDRWLTDLYG NDEAKKQTAI DAARAVQAQE LTRVARQVRD NERRLASQVD AVAALTLLQR DLFARINPAI VEAYLDRLSA AGVLQAAPTA AGPGFRRLSL AGQRLPDSLG GGTDAHIATS GEAVRAAEES IDVGDTVTLG PGEPAFTDLI ALADRALAED LYRSGAAADP SSLTPYDLYA YEATMTESDG KRASVWATLV KVDDSGNARA VRWETLANLV PTDIAGTAAH PAREGRAQEV AREVADTTVS EHRKVRTDWF GQARRDLNNL PLNLTEGIED RDTRVALRRQ FQVQTSARIA ELERLTNVQL TEPKLVGRIR VLAAADAGTQ AEIDAEMVSM SHVRQLLVDD GWVVEDVHTE GRGYDLEARR NSQIRHIEVK GVLDSAASNG IRMTGNEVLI ATQHRRSYWL YVIDQCADGV GRFFGAYEDP ATLFSTDMTG DAIFRVPGSS LKNAPGSNL
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