Gene Mmcs_5448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5448 
Symbol 
ID4114533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp29129 
End bp29572 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID638034603 
Productcupin 2, barrel 
Protein accessionYP_642604 
Protein GI108802408 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value0.708388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACGT TCCTCGAACC ACAGCGATGT GCCGACGATG TGACCGCCCT GAAAGTGATG 
ACAGAGGAAA TGCGCCCGCT TCTGATCGGC GACGGCTACC AGATGTTCGA GGTGCGCGCA
CCTGAATCAT CTGGACCGCC TCCGCACCAG CATCCCTGGG ATGAAAGCTA CGTGGTGCTC
GAGGGCGTGC TGTGGGTAAG CCGCGGCGGC GAAGAAGCGA CCCTGCAGGT GGGTGAGGCG
ATTCGGGTGC CGGCCGGCGT CGTGCACGCC TATCGCGTTC TCTCTGACGG CGCCCGGTGG
ATCACGACCT CGTCTACCCC GGGCGGCGCG CTGGATTTCT TCTCCGATGT GGATGCCGCG
TCCAACGGCC CCGGCGACGT GAGAGCCCTC ATCGAGGCCG CGAAGCGAAA CAGGGTCGAA
TTCGCCGATC CGGCATTGCA ATAG
 
Protein sequence
MSTFLEPQRC ADDVTALKVM TEEMRPLLIG DGYQMFEVRA PESSGPPPHQ HPWDESYVVL 
EGVLWVSRGG EEATLQVGEA IRVPAGVVHA YRVLSDGARW ITTSSTPGGA LDFFSDVDAA
SNGPGDVRAL IEAAKRNRVE FADPALQ