Gene Mmcs_5446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5446 
Symbol 
ID4114531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp27426 
End bp28085 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content60% 
IMG OID638034601 
ProductMarR family transcriptional regulator 
Protein accessionYP_642602 
Protein GI108802406 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.668367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGAA AGAAAGACCA CCGACCATTT GCCGGTATGA TCGGCACCCG GGTGGAGATG 
TCTGCCGAAC CGCTGATCAA CGTTGCAAGG GACTTCATGA GTACCGAGAA GTTGACGATG
GCCGAACAGG TCGCGGCCAA GACCCGCGAA GCCGGACCCG ATCACGACCC CTCTTCGTTG
GCGCTCCCGC TTGCGCTCTA CCGTGCTGTG ACCGCCTTCG GTCGGGTCGC CGCCGAGGAG
TTGGCCCCGG TCGACCTTTC GATGAGCCAG TTCAACGTCC TCACCGTCCT GAAGCGGGCC
GAGAGGCCGA TCACGATGGG CGCACTAGCG GACTCTATTT CTGTACGCCA AGCCAGCCTG
ACGAGTGTCG TCGACAGCCT GACCAAGGCA GGCTTTGTCA CACGCAAGGT GAATCCCCGC
GATCGCCGTT CGGTGGTGGT CGCGATATCG AAGAAGGGCG ATCAGTTCAT GACCGAGTTT
CTGCCCGGTC ATTACGACTT TCTGCAGAGA CTCTTTGCCG GTATCAAACC GCGGCACAGA
CAGCAGTTGC TTGCACGACT GGATGAACTC ATCGATTGTT TGGAGGCATA TCCGACCGAC
ACGCAAAAGG CGATCCGCAG CTCGTTATCG CAGGCCGCCG CAGGCCAGAC CAGGCCATAG
 
Protein sequence
MSGKKDHRPF AGMIGTRVEM SAEPLINVAR DFMSTEKLTM AEQVAAKTRE AGPDHDPSSL 
ALPLALYRAV TAFGRVAAEE LAPVDLSMSQ FNVLTVLKRA ERPITMGALA DSISVRQASL
TSVVDSLTKA GFVTRKVNPR DRRSVVVAIS KKGDQFMTEF LPGHYDFLQR LFAGIKPRHR
QQLLARLDEL IDCLEAYPTD TQKAIRSSLS QAAAGQTRP