Gene Mmcs_5353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5353 
Symbol 
ID4114180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp5639348 
End bp5640034 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID638034509 
ProductTetR family transcriptional regulator 
Protein accessionYP_642510 
Protein GI108802313 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGAG CGCCGTCGCA AGGGGGCCGC CCGCGCCGCA GTGGCATCGT CGCCGAGGAT 
CCGCGCGGAG ACATTCTCAA GGCCGCCGCA GAGTTGTTCG CGGCGAACGG ATTCGGATCC 
ACCCGCATGG AGGCGATCGC GCAGCGGGCA GGGCTGGGAC AGTCGTCGCT CTACTACTGG 
TTCCGGTCCA AAGACGCGAT CCTGCGAGGC ATCATGAACC AGAACCGGGT GTCGCTGGAG 
GCAGCGCGGG CCTTGACCGA CCGCGATGAA TCAGCGGCGG TGCGGCTCTA CATCGTGCTG 
TACCAGGATG TGGTCCAGAT GTGCACTGCA CCGCTGAACT TCTACGACCT GGAAGAGGCG 
GCGAAGAAGC AGCCGGACGT CTTCAGCGAC TTCCAGGGTG ACTACGAAGA GTTGGCGGTG 
CGACTCCGCA CCATCATCGA ATCAGGGGTC AGATCGGGCG AGTTCATCGA CGTCTCTCCC 
GAGGAGTTCG CGCGCACGGC GCTGTGCCTG AACGAGGGAA GCCAGTACCG CTACCACGCG 
ACCGGTCAGA GCCGCGAGGA CCTGCACCTG TTCGCCGACG CCGCAGCGAG AACGTCGCTG 
CGGGCGGTGA TGGCCGACGT CGACCAGTTG GCCGGTGTGC AGGAAGCCGC CCGCGACGGA 
ATCGCCGGGT TCAGCAGTAG CCCGTAG
 
Protein sequence
MTRAPSQGGR PRRSGIVAED PRGDILKAAA ELFAANGFGS TRMEAIAQRA GLGQSSLYYW 
FRSKDAILRG IMNQNRVSLE AARALTDRDE SAAVRLYIVL YQDVVQMCTA PLNFYDLEEA 
AKKQPDVFSD FQGDYEELAV RLRTIIESGV RSGEFIDVSP EEFARTALCL NEGSQYRYHA 
TGQSREDLHL FADAAARTSL RAVMADVDQL AGVQEAARDG IAGFSSSP