| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5287 |
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| Symbol | |
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| ID | 4114114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 5574762 |
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| End bp | 5576051 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638034443 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_642444 |
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| Protein GI | 108802247 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCGCGC TGGTCGACGC ATCGCGCCTC GGACTCGCGG TCCCCGACGG CGCGCCCCAG
GACCTCGACC GGCCCATCAG CTGGGCGCAC ATCACCGAGA TGCGCGATCC GTCGCGGTAC
CTGCGCGGCG GCGAGTTGGT GTGCACGGTC GGCTTGAGCC TGCAGACCCC GCAGGACTGC
CGGACGTTCG CCGACGCGTT GGCCGCGGCA GCAGTGGCCG GCGTGTGTTT CGGCGTCGGC
GACGGTCACG ACGAGGTGCC TGTCGCGCTG CTGGATCAGT GCCGGCGCCA CGGGCTGCCG
GTGTTGATCG CCTCGCCGAG TGTGCCGTTC AGCATGGTCA GCCGCTTCGT CGCCGAGTAC
GAGATGGGCG CCGAGATCGC CGTCGCACGG GCGACCTACG CGCTCGTGCC CGAGCTGCTC
TCGGCGTTGC GGCGGCACGC GTCGGCCGAT GAGCTCCTCG ACACCGCAGG CCAGATCCTG
GGGTGCCGCT TCCTGCTCGA CCCCGACGGC GGGCCGCCGA GTTGGATCGG TGGCGGCACC
CCGCCGGAGC CGGCGCTGCT CGACCTGATC GCCCGGTTCG TGCGGGCGAC CCAGGGGGAA
CGAGACGTCG AGGCCGCGCT CGCGCGCGAA CGCGTCGGAC AGCTGCTCTC CCTCGTCGAG
CGGCGGATGC TCCTGCCCGA TGCGCTTGGG CAGCTGCTGG ACTGGCCGGG GCTGACAGCG
GGTCAACTCA CGTGTTCGGC GTGGCCGGCC GGCGCCGGAG CGCTGCTGTC GATCGCCTTC
CCCGACGCGT TGGTCGGTGA CGCGCCGGAT CTGTGCCTCA TGGTGATGAC GCATCCGCTC
GACCTGACCG ACGATCTGTC GCTGCCCTCG GGCCACTCGG CGCTGGTGCC CCTGACGGAG
ATCGGTTCGG CGATCGGCCA GGCGCGGAGT GCGCTGGAGC TGGCTCAGCG CAGTGGCCGC
CGCGTCGGAC CGGACCAGTT GAGCACACTC GACAGCCTGC TCGAACAGCT CCCGCCGGCG
CAGCTGGCGC CCTTCCGCCA GCAGCTCATC GAGCCGCTCG CGGAGATGGA CCGGCGGCGG
GGGACGCAGC ACGTGCGCAC ACTGCGGGCA TTCCTCGCCG CCAACGGTTC ACTCAGCGAC
ACCGCCCGCG ACCTCTACCT CCACACCAAC ACGGTGCGCC ACCGGTTGGC CCGAATCGTC
GAGCTGACCG GCCGGGACCC GTTGAACCAC AACGACCAGG CGGCGTTCTC GATCGGTCTG
CACGCGGCCG ATCGGGAATC GACCCGGTGA
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| Protein sequence | MRALVDASRL GLAVPDGAPQ DLDRPISWAH ITEMRDPSRY LRGGELVCTV GLSLQTPQDC
RTFADALAAA AVAGVCFGVG DGHDEVPVAL LDQCRRHGLP VLIASPSVPF SMVSRFVAEY
EMGAEIAVAR ATYALVPELL SALRRHASAD ELLDTAGQIL GCRFLLDPDG GPPSWIGGGT
PPEPALLDLI ARFVRATQGE RDVEAALARE RVGQLLSLVE RRMLLPDALG QLLDWPGLTA
GQLTCSAWPA GAGALLSIAF PDALVGDAPD LCLMVMTHPL DLTDDLSLPS GHSALVPLTE
IGSAIGQARS ALELAQRSGR RVGPDQLSTL DSLLEQLPPA QLAPFRQQLI EPLAEMDRRR
GTQHVRTLRA FLAANGSLSD TARDLYLHTN TVRHRLARIV ELTGRDPLNH NDQAAFSIGL
HAADRESTR
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