| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5253 |
|---|
| Symbol | |
|---|
| ID | 4114080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 5539735 |
|---|
| End bp | 5540265 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638034409 |
|---|
| Product | phenylacetic acid degradation-related protein |
|---|
| Protein accession | YP_642410 |
|---|
| Protein GI | 108802213 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG ATGCGACATT GACCGCCCGA AGCGGGCACT GGGGCGCCGA GAACACCCGC
ACTGTGTCCT GGCACGATCC CGGCCCGACC ACGAACGAAG GCCTGCGCAT GGCCGGCATC
GACTACCTGC GGGCGATGCT CGACGGGCGG TTGCCGCCGC CCCCCATCGC GAACCTGCTC
CAGATGGGGC TGACGGCAGT CGAACCCGGC CGGGTCACGT TCACGTGCAC GCCCGACCAG
TCGACCTACA ACCCCATCGG GGCCGTCCAC GGTGGTCTGG TCTGCACACT GCTCGACTCG
GCGGCGGGAT GCGCGATGCA CAGTGTGCTG GCAGCGGGCC GCGGGTACAC CTCCGTCGAG
ATCAAGGTCA ACTACCTGAG GGGGGTCCGG CTGGACACCG GCCGATTGAC CGCCACCGGT
ACCGTCATCA AAGCCGGTGC GCGCGTTGGC TTCACCGAGG CGACGGTCAC CGACGACACA
GGCACCCTGA TCGCTTCCGC GAGCAGCACG CTGCTGATCT TCGATCTCTG A
|
|---|
| Protein sequence | MTQDATLTAR SGHWGAENTR TVSWHDPGPT TNEGLRMAGI DYLRAMLDGR LPPPPIANLL
QMGLTAVEPG RVTFTCTPDQ STYNPIGAVH GGLVCTLLDS AAGCAMHSVL AAGRGYTSVE
IKVNYLRGVR LDTGRLTATG TVIKAGARVG FTEATVTDDT GTLIASASST LLIFDL
|
|---|
| |