| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5167 |
|---|
| Symbol | |
|---|
| ID | 4113996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 5455415 |
|---|
| End bp | 5456359 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 638034325 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_642327 |
|---|
| Protein GI | 108802130 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG5178] U5 snRNP spliceosome subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCGGA ACGCGAATCG CTTTGCCACG AGAGCGCTGG CCGTTGTCGG CCTGATATCG
GCCGGCCATG TGGTCGCCCC ACCGGCGATG GCTCAGCCCA GTCCGGGGGT GCCGTGTCTG
GAGATGGTGC AGCAGTTCGC GGCGTCGCCG CCGGACTTCG AGGAGTCGTT CGCGACCGCG
GCGACGGCTC TCGCCGAGCA GGCCGCACCA CCGGCCGAAA GCGTGGTCGA GGCCGCGCCG
GTCGCGGAGA TGGCGGCGCC GATGGCGGCT CCCGCGGCCG AGGCGGCGGT CGCGCCCGTC
GTGGACGCGC CGGCGGCCGT CGTCGTCGAA TCCGCAGGCG CTCCGGCCCC GGTACCCGCC
GCACCGGCGG TCCCGTTGGC GGCCGCACCA CCGGTGGCCG TGCCCCCGCT CCCGCCGGTG
CCCGCGGTCC CGGCCTCAGC CCCGGCCCCG GTCCCAGCGG CCGCACCGCT TCCGCCTCCG
GTCGCCGCAC CCGTTGCGCC GCCACCGGTG GAAGCCGCGC CAGTGGTTCA GCAGGCAGAA
CCGGTGCCGC CGCCGCCCGT AGAAGCGCCG CCTCCGCCGC CACCGCCCGT GGAAGCGCCG
CCGCCGCCGC CACCGCCCGT GGAAGCGCCA CCGCCACCCG CCGTAGAAGC GCCCCTGCCG
CCGCCACCCG TGGAAGCCGC GCCACCGCCG CCCGAGGAAG CCGCGCCACC GCCGCCCGTG
GCCGAGACCG TCGAGCACGC GTCGGCGCCG GTGGTGCCGC CGGTCGACGC CGCCGAAGTG
GTGAGCGCGG CGGCCTCCGC CCTCACCGCA CCGCCGGCAC CTTCAGCACC CGCAGCGGCC
GCCCCGCCCT CGATCACCTT GCCGACGGTG CCCGGGTTCC CGGTGCAGTT GCCCAGCGAG
CTGTCGATGC CCCGCGACCT GGTCTGCGAG GGGACCGCGT TCTAG
|
|---|
| Protein sequence | MSRNANRFAT RALAVVGLIS AGHVVAPPAM AQPSPGVPCL EMVQQFAASP PDFEESFATA
ATALAEQAAP PAESVVEAAP VAEMAAPMAA PAAEAAVAPV VDAPAAVVVE SAGAPAPVPA
APAVPLAAAP PVAVPPLPPV PAVPASAPAP VPAAAPLPPP VAAPVAPPPV EAAPVVQQAE
PVPPPPVEAP PPPPPPVEAP PPPPPPVEAP PPPAVEAPLP PPPVEAAPPP PEEAAPPPPV
AETVEHASAP VVPPVDAAEV VSAAASALTA PPAPSAPAAA APPSITLPTV PGFPVQLPSE
LSMPRDLVCE GTAF
|
|---|
| |