Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5115 |
Symbol | |
ID | 4113944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5408478 |
End bp | 5410622 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638034273 |
Product | glycogen debranching protein GlgX |
Protein accession | YP_642275 |
Protein GI | 108802078 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCGCAG CCCCCAAACC GAACGTCACC CCCGAAGTAT GGCCCGGTAA GGCATACCCC CTCGGAGCGA CGTATGACGG CTTTGGCACC AATTTCGCGT TGTTCAGCGA GGCCGCCGAG CGTGTGGAGC TGTGCCTGTT CGACGCCGAC GGCGAGCAGA CGGCGTGTGT CACCCTGCCC GAGGTCGACG GCTTCGTCTG GCACGGGTTC ATCCCGAACA TCGAGCCGGG TCAGCGCTAC GGCTACCGCG TGCACGGCCC GTACGATCCG CCCAACGGTC AGCGGTGCAA TCCGAACAAG CTGCTGCTCG ACCCGTACGC CAAGGCCATC GACGGCACCT TCGACTGGGG CCAGCCGCTG TTCAGCTACA ACTTCGGCGA TCCGGACAGC CGCAACGACG ACGACTCGGC GGATTGCATG CCGAAGTCGG TGGTGATCAA CCCGTACTTC GACTGGGGCA CCGACCGCCC GCCGAACCAT GAGTACGCCG ACACGGTGAT CTACGAGGCC CACGTCAAGG GTCTGACGCA GACCCACCCC GACATCCCCG AGCAGATCCG CGGCACCTAC TCGGCGGTGG CCCACCCGGT GATCATCGAC CACCTCAAGG CGCTCGGTGT CAACGCGATC GAGCTGATGC CGGTGCACCA CTTCGCCAAC GACTCGACGC TGCTCGACAA GGGGCTGTCG AACTACTGGG GCTACAACAC GATCGGGTTC CTCGCCCCCG ATCCCAAGTA CAGCTCGAGC CTCACCCCCG GTGGCCAGGT GCAGGAGTTC AAGGCGATGG TGCGCACCCT GCACGAGGCG GGGATCGAGG TCATCCTCGA CGTGGTCTAC AACCACACCG CCGAGGGCAA CCACATGGGG CCGACGCTGT CCTTCCGCGG CATCGACAAC GCCGCGTACT ACCGGCTCGT CGACGACGAC AAGCGCTACT ACATGGACTA CACCGGCACC GGCAACAGCC TCAACGCCGG CCACCCGCAC GCCCTGCAGC TCATCATGGA CTCGCTGCGG TACTGGGTGA CCGAGATGCA CGTCGACGGT TTCCGGTTCG ATCTGGCCTC GACGCTGGCC CGCGAGTTCT ACGACGTCGA CCGGCTGGCG ACGTTCTTCG AACTCGTGCA GCAGGATCCG ACCGTCAGCC AGGTCAAGCT GATCGCTGAA CCGTGGGACG TCGGCCCGGG CGGGTACCAG GTCGGCAACT TCCCGCCGCA GTGGACGGAG TGGAACGGCA AGTACCGCGA CACCGTGCGC GACTACTGGC GCGGCGAATC GGCGACGCTG GACGAATTCG CCTCGAGGCT GACCGGGTCG TCGGACCTCT ACGAGCACAC CTCGCGCAGG CCCGTCGCGT CGATCAACTT CGTCATCGCC CACGACGGCT TCACGCTGCG GGACCTGGTG TCCTACAACG AGAAACACAA CGAGGACAAC GGCGAGGACA ACAACGACGG GGAGAGCCAC AACCGGTCGT GGAACTGCGG TGTGGAAGGC CCGACGGACG ATCCTCAGGT CAACGCGCTA CGCAGCCGTC AGCAGCGCAA CTTCCTCACC ACCCTGCTGC TGAGCCAGGG CGTGCCGATG ATCGCGCACG GCGACGAGCT CGGGCGCACG CAGCACGGCA ACAACAACGT CTACTGCCAG GACAACGAAC TGTCCTGGAT CGACTGGTCG ACCGTCGACA CCGAGTTGAT GGCGTTCACC CAGAAGGTCT CGGAACTGCG CGCCGCACAC CCGGTGTTCC GTCGGCGCCG GTTCTTCTCC GGCCGTCCGG TCCGCCAGCG CGGTGCGCCC GGCCTCCCCG ACATCGCCTG GTTCGCCCCC GACGGCTCGG AGATGACCGA CGAGGACTGG GACAGCGGCT TCGCCAAGTC GATCGCGGTC TACCTCAACG GCCAGGGCAT CCCCGATCTG GACGTCCGCG GTCAGCGCGT CACCGACGAC TCGTTCCTGC TGTGTTTCAA CGCCCACCAC GAGCCGCTCG AATTCGCCAT GCCCGCAGCG GAATTCGCCC GGGCCTGGCT CCCGGTGATC AACACCGCAG ACGACGATGA CGCCCGCGAG TCGGTGACTG CGGGCGCCAA GATCGAGGTC GCCGAACGGT CGGTGCTGGT GCTGCAGGCC GTCAACGAGC CCTGA
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Protein sequence | MAAAPKPNVT PEVWPGKAYP LGATYDGFGT NFALFSEAAE RVELCLFDAD GEQTACVTLP EVDGFVWHGF IPNIEPGQRY GYRVHGPYDP PNGQRCNPNK LLLDPYAKAI DGTFDWGQPL FSYNFGDPDS RNDDDSADCM PKSVVINPYF DWGTDRPPNH EYADTVIYEA HVKGLTQTHP DIPEQIRGTY SAVAHPVIID HLKALGVNAI ELMPVHHFAN DSTLLDKGLS NYWGYNTIGF LAPDPKYSSS LTPGGQVQEF KAMVRTLHEA GIEVILDVVY NHTAEGNHMG PTLSFRGIDN AAYYRLVDDD KRYYMDYTGT GNSLNAGHPH ALQLIMDSLR YWVTEMHVDG FRFDLASTLA REFYDVDRLA TFFELVQQDP TVSQVKLIAE PWDVGPGGYQ VGNFPPQWTE WNGKYRDTVR DYWRGESATL DEFASRLTGS SDLYEHTSRR PVASINFVIA HDGFTLRDLV SYNEKHNEDN GEDNNDGESH NRSWNCGVEG PTDDPQVNAL RSRQQRNFLT TLLLSQGVPM IAHGDELGRT QHGNNNVYCQ DNELSWIDWS TVDTELMAFT QKVSELRAAH PVFRRRRFFS GRPVRQRGAP GLPDIAWFAP DGSEMTDEDW DSGFAKSIAV YLNGQGIPDL DVRGQRVTDD SFLLCFNAHH EPLEFAMPAA EFARAWLPVI NTADDDDARE SVTAGAKIEV AERSVLVLQA VNEP
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