Gene Mmcs_5075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5075 
Symbol 
ID4113904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5373997 
End bp5375535 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content71% 
IMG OID638034233 
Productamine oxidase 
Protein accessionYP_642235 
Protein GI108802038 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCG TCGGGGGGCG AACAGACCGC GTGGTGGTCG TCGGCGCCGG ATTGTCCGGC 
CTGTCGGCCG CACTACAGCT GGCCGGGCGC GGCCGCACCG TCACGGTGCT CGAACGCGAG
ACGTTCCCGG GCGGCCGGAT GGGCCGGCTC GACATCGACG GGTACCGGCT CGACACCGGG
CCGACCGTGT TGACGATGCC CGACATCATC GAGGACGCCT TCGCCGCCGT GGGCGATTCG
ATGACCGGGC GCCTCGAACT CGACCGCGTC GACCCGGCCT ATCACGCGTC GTTCGCCGAC
GGCAGCGGCC TGTACGTGCA CACCGATGCC ACTGCGATGG CCTCCGAGAT CGAACGCTTC
GCCGGCTCCG ACGCCGCCGA CGGCTATCTG CGGCTGCGCA CCTGGCTGAC CCGGCTGTAC
CAGGCCGAGT TCAACGGTTT CATCGCCTCC AACTTCGATT CACCGCTGTC CCTCGTGACA
CCCCAGCTGG CCCGGCTGGC CGCGATGGGC GGTTTCCGGC GGTGGGATCG CGTGGTGCGC
AACTACATTG CCGACGAACG GCTGCGCCGC ATCTTCACCT TCCAGGCCCT CTACGCCGGC
GTGCCACCAC ACAAGGCGCT GGCCGCCTAC GCGGTGATCG CCTACATGGA CACCGTGGCG
GGGGTCTACT TCCCCCGCGG CGGCATGCGC GCCGTACCGG ATGCGATGGC GGCCGCCGCC
GCCGACGCCG GAGTCGAATT CCGTTACGGT TCAGCGGTTT CCGTCCTCGA ACGCAGCGCA
GACGGCCGGG TGACGGCGGT GCGCACCGAC GCGGGTGACC GCATCCCCAC CGACGCCGTC
GTCCTCACCA CGGAATTGCC GACGACCTAT CGCCTGCTCG GCCGCACACC GCGGCGCCTG
CTGCCGCTGC GGCCTGCGCC GTCGGCGGTG GTGGCACATG TCGGGTGCGC CAAGGTGGAT
CCCGGCGGGG ATGTCGTGGC GCACCACAAC ATCCTGTTCG GCGGCGCCTG GGAGCAGACG
TTCCGCGACA TCATCGACGA GGGACGGGTG ATGAGCGATC CCTCGCTGCT GGTCACCCGG
CCCACCGCCG GCGACCCGAG CCTCGCACCA CCGGGTCGCG ATCTGCTCTA CGTGCTGGCG
CCCGCACCGA ACAAGGCCGT GGGACACGTC GACTGGTCTC AGACGAGCGA CGCCTATGTC
GAGGGGATGC TGGCCACGGT GCGCCGGCGG ATGCCCGCGG TCGGCGACGA CCTCGAACTG
CTGCACGTCG TGGACCCCGA CGGGTGGGCC CGCCAGGACA TGGCGGCGGG CACCCCGTTC
GCGTTGGCGC ACACCTTCGG CCAGACCGGC CCGTTCCGGC CCGCGAACAC GATTCGCGGC
GCCGAGAACG TCGTGCTGGC CGGATCGTCC ACGGTCCCCG GCGTCGGGGT GCCGACCGCG
TTGCTGTCCG GCCGGTTGGC CGCAGATCGA ATCACCGGGA CCGTCGCGTC GTCCAACCCG
ACGGCGGCCC CGACCAGAAC GAGGAGCGGG CTGTCATGA
 
Protein sequence
MRTVGGRTDR VVVVGAGLSG LSAALQLAGR GRTVTVLERE TFPGGRMGRL DIDGYRLDTG 
PTVLTMPDII EDAFAAVGDS MTGRLELDRV DPAYHASFAD GSGLYVHTDA TAMASEIERF
AGSDAADGYL RLRTWLTRLY QAEFNGFIAS NFDSPLSLVT PQLARLAAMG GFRRWDRVVR
NYIADERLRR IFTFQALYAG VPPHKALAAY AVIAYMDTVA GVYFPRGGMR AVPDAMAAAA
ADAGVEFRYG SAVSVLERSA DGRVTAVRTD AGDRIPTDAV VLTTELPTTY RLLGRTPRRL
LPLRPAPSAV VAHVGCAKVD PGGDVVAHHN ILFGGAWEQT FRDIIDEGRV MSDPSLLVTR
PTAGDPSLAP PGRDLLYVLA PAPNKAVGHV DWSQTSDAYV EGMLATVRRR MPAVGDDLEL
LHVVDPDGWA RQDMAAGTPF ALAHTFGQTG PFRPANTIRG AENVVLAGSS TVPGVGVPTA
LLSGRLAADR ITGTVASSNP TAAPTRTRSG LS