Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5074 |
Symbol | |
ID | 4113903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5372844 |
End bp | 5373968 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638034232 |
Product | polyprenyl synthetase |
Protein accession | YP_642234 |
Protein GI | 108802037 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGTG TCGACGATCG GCTGCTCGCC GCAGCTTTGC GGCCAGCCCC AGCCCGGCTC ACGGCCGACT CCTTCGACAC CTGGCGCAGG GATGTACGCC GCGCGGCGAT CGATGCGGTG ACCGAGTTCG TCACCGACCG GTGCGCCGAC GACCTGCGGC TCACCGGTGT CGACGTCACC CTCGACGTGC TCTCCGACTT CGTCAGCGAC GGTAAGTGCC TGCGCTCGAC GTTCGCCTAC CTCGGTTGGC TGGCCGGTGC CGCACCCGAC GACGCCGCCC TGCGCGCCGC GGCGAGTTTC GACCTGCTGC ACGTGTTCGC ACTGCTGCAG GACGACGTGA TGGACGACTC ACCGCTGCGC CGTGGCCGTC CGGCGGCGCA TGTGCGCTTC GCGCAGTGGC ACCGGGACAA CGGACTCAAC GGATCCGCGG AGCGGTTCGG CGCCTCGGCG GCGGTGCTGC TCGGCGACCT CTGCCTGGTG TGGGCGGGGC AGATGATGCG CGAGAGCGGT CTGGGTGACC GGGCACTGGC CCGGGCGTGG CCCCGGTATG ACGCGATGCG CACGGAATTG GCGGTGGGCC AGTTCGCCGA TCTGGTCAAT GATGCGGGCG GACGGCCGAC ACTGGAGGAC GTGCTCGACG TCGCACGCCG CAAATCCGGG AACTACACGG TGCGCCGCCC CCTGGAGATC GGCGGTGCAC TGGCCGGCTG CCCGGACGCG ACGCTGGGCT TGCTCGGCCG CTACGGCGCG GCCGTCGGTG AGGCGTTCCA GCTGCGCGAC GACCTCCTCG GCATCTTCGG TGCCCCGACG GTGACCGGCA AACCCGCAGG CGGCGACCTG TCCGAACACA AGGCCACCAG CGTGGTGGTC GCGGCGCACC GGCTGGCCGA ACCGTCGGTG CGCAACCAAC TCACCGAGTT GATGTCGCGA CGCGACCTCG ACGCGGGTGA CATCACCCGC TGGCAGCACC TCATCGCCGC GACCGGCGCC GTGCAGTGGA TCGAGCAGCT GATCGACCGG CGGCTCTCCC ATGCGCTGGA GCGCATCCAC ACCAGCCCAC TCGACGACAC CGTCAGAACC GCACTGGTCA ACATGGCCGC CGTATGCACC CGGCGGGCAG CGTGA
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Protein sequence | MSGVDDRLLA AALRPAPARL TADSFDTWRR DVRRAAIDAV TEFVTDRCAD DLRLTGVDVT LDVLSDFVSD GKCLRSTFAY LGWLAGAAPD DAALRAAASF DLLHVFALLQ DDVMDDSPLR RGRPAAHVRF AQWHRDNGLN GSAERFGASA AVLLGDLCLV WAGQMMRESG LGDRALARAW PRYDAMRTEL AVGQFADLVN DAGGRPTLED VLDVARRKSG NYTVRRPLEI GGALAGCPDA TLGLLGRYGA AVGEAFQLRD DLLGIFGAPT VTGKPAGGDL SEHKATSVVV AAHRLAEPSV RNQLTELMSR RDLDAGDITR WQHLIAATGA VQWIEQLIDR RLSHALERIH TSPLDDTVRT ALVNMAAVCT RRAA
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