Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5068 |
Symbol | |
ID | 4113897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5369082 |
End bp | 5369909 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638034226 |
Product | MIP family channel protein |
Protein accession | YP_642228 |
Protein GI | 108802031 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.71926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGAGC CGACCATGAT GCATCGGGTG GCCGCCGAGT TCATCGGAAC GTTCTGGCTG GTCTTCGGCG GCTGCGGCAG CGCGGTGTTC GCCGCCAAGT ACACCTCGGC CGACGGATAC GCGTTCGGCA TCGGGTTCCT CGGCGTCTCG CTCGCCTTCG GTCTCACGGT GCTCACCGGC GTGTACGCGT TCGGGACGAT CTCCGGCGGG CACTTCAACC CCGCGGTCAC GCTGGGCGCG GCACTGGCCC GACGGGTCGA ATGGCGTGTG CTGCCGGCCT ACTGGCTCAC CCAGGTGATC GCCGGCGTGG CGGCCGGACT CGTCATCTAC GTCATCGCCA AGGGGCGTGA GGGGTGGACC GCCACCGGAA ACATGGCCGC CAACGGCTAC GCCAACCACT CGCCGGCGGG CTATTCGCTG CTGGCCGTCG TCATCGCCGA GGTCCTGCTG ACGGGCATCT TCCTCCTGGT GATCCTCGGC GCCACCGACA CCCGCGCCCC GAAGGGGTTC GCCGGGCTGG CCATCGGGCT GACCCTGACC CTGATCCACC TGATCTCGAT CCCGATCTCG AACACCTCGG TGAACCCCGC CCGCTCCACC GGCGTGGCGT TCTTCAACGG CAACGAGGCG CCCGCGCAGC TGTGGGTGTT CTGGATCGCC CCCCTTCTCG GCGCCGCCAT CGCCGGCGCG GCCTACCCGT ACCTGTTCGG GCGACACGAG GAACTGGCCG ATCGGCCGGT CCGCGACGAA ACGCTCGACG CCCAGGTGCG CGCCGAGGAC GTCGCGGACG CGCGCCTACG ACGTGGTCCC GACCCAGAGG TCCGGTAG
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Protein sequence | MREPTMMHRV AAEFIGTFWL VFGGCGSAVF AAKYTSADGY AFGIGFLGVS LAFGLTVLTG VYAFGTISGG HFNPAVTLGA ALARRVEWRV LPAYWLTQVI AGVAAGLVIY VIAKGREGWT ATGNMAANGY ANHSPAGYSL LAVVIAEVLL TGIFLLVILG ATDTRAPKGF AGLAIGLTLT LIHLISIPIS NTSVNPARST GVAFFNGNEA PAQLWVFWIA PLLGAAIAGA AYPYLFGRHE ELADRPVRDE TLDAQVRAED VADARLRRGP DPEVR
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