Gene Mmcs_4949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4949 
Symbol 
ID4113778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5240493 
End bp5241407 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID638034103 
Producthaloalkane dehalogenase 
Protein accessionYP_642109 
Protein GI108801912 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00300745 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGC TGCGCACCCC GGACGAACGG TTTCTGGCTC TGCCCGACTT CCCTTATCCG 
CCAGGTTATT CCGACATCGA CGACGGTGAC GGTGGCCGGC TGCGGGTGGC CTGGGTGCAG
GATGGGCCTG CCGACGGCGA ACCGGTGTTG ATGCTGCACG GCGAGCCGTC GTGGTCGTTC
CTGTACCGCA AGATGATCCC GATCCTGGCG GGCGCGGGGT TCCGCGTCGT CTGCCCCGAC
CTCGTCGGGT TCGGCCGTTC CGACAAGCCC ACGCGCGTCG AGGACCACAC CTACGCCCGC
CACGTCGAGT GGATGCGCAC GCTCGCGTTC GATGTGCTCG ACCTGCGCGG GGTGACGCTG
GTGGGGCAGG ACTGGGGTGG GCTGATCGGG CTGCGGTTGG CCGCCGAACA CCCCGACCGG
TTCGCCCGCA TCGTCGTCGC GAACACCGGG CTGCCGACCG GGGATTTCCC GATGCCCGAC
ATCTGGTGGC AATTCCGCAA CGCGATCCAG ACTGTGGACG ATCTCGACGT GGGGCGATGG
GTTCAGGCCG GATGTGCTCA TCCGATGTCC GACGAGGTGC GCGCCGCCTA CGACGCCCCG
TTCCCCGACG ACTCCTACTG CGCAGGCCCC CGCGCGATGC CGCTGCTTGT GCCCACCACG
CCCGAGGACC CGGCGTCGGC GGCGAACCGC GCGGCGTGGG CGGCGCTGTC CGCCAGCGAC
ACCCCGATGC TCGTCGCGTT CAGCGACAGC GATCCGATCA CCGGCGCGAT GGCGCCGATC
TTCGCCCGCG AGATGCGCGG CGCCGCGGGC ATCGACCACC CGACGATCCG CGAAGCGGGA
CACTTCCTGC AGGAGGACGC GGGCGAGGAC CTCGCCCGGG CGGTCGTCGA GTTCTGCCGC
AGGCGGTCCT GTTGA
 
Protein sequence
MQTLRTPDER FLALPDFPYP PGYSDIDDGD GGRLRVAWVQ DGPADGEPVL MLHGEPSWSF 
LYRKMIPILA GAGFRVVCPD LVGFGRSDKP TRVEDHTYAR HVEWMRTLAF DVLDLRGVTL
VGQDWGGLIG LRLAAEHPDR FARIVVANTG LPTGDFPMPD IWWQFRNAIQ TVDDLDVGRW
VQAGCAHPMS DEVRAAYDAP FPDDSYCAGP RAMPLLVPTT PEDPASAANR AAWAALSASD
TPMLVAFSDS DPITGAMAPI FAREMRGAAG IDHPTIREAG HFLQEDAGED LARAVVEFCR
RRSC