| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4841 |
|---|
| Symbol | |
|---|
| ID | 4113670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5124292 |
|---|
| End bp | 5127360 |
|---|
| Gene Length | 3069 bp |
|---|
| Protein Length | 1022 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638033994 |
|---|
| Product | MMPL |
|---|
| Protein accession | YP_642001 |
|---|
| Protein GI | 108801804 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR00833] Transport protein
[TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0784394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACC GCACGACAGG CTCCTCGACA GCACCTGCCG CCCCAACTCG CCGGCGTGAC
AGCCCTTCCG CCGATCCCCC ACACAGCCGC GAGTACAGCG CCCGGCTGGC GGCGCTGGGC
CGATTCACAG TGCGGCACAA AGCACTAACC ATCGGGGTGT GGATCGGCGC CGCCATCATC
CTGGCGCTGC TGTTCCCCCA GTTGGAGACG GTGGTTCGGC AGCAGTCGGT GGATCTGATA
CCGCGCGACG CCCCGTCCCT GCAGACGGTG GAGCGGATGA GCACGGCCTT CGGCGAGCAA
GGGTCGAAAA CCGTGCTGAT TGTGGCCATG GAAGATCCTG CCGGGCTGAC CCCTGCGGCC
CAGCAGCGCT ACGACCGCCT TCTGGAGCGG CTGCGCGCCG ACAGTGAGCA CGTGTTGCTC
GTGCAGGATC TGCTGGCCGA TCCGGTCACG AAAACCCAAG CCGTCAGCGC CGACGGCAAA
TCGTGGTATC TGCCGGTCGG AGTGACCGGC ACGCTGGGTG ACCCCACGGC CGCCGAGTCA
GTCAAGGCGG TGCGTGACAT CACCGCCGAG GTGTTCAGCG ACTCCACCAC CACCGCGCAC
GTCACCGGAC CGCCGGCGAC GTTCAGTGAC ATGATCGCCT CCGCCGAGCA CGATCTGCTG
TTGATCTCGA TCGCCACCGC CGGCATGATC GCCCTGATCC TGCTGATCGT CTACCGGTCG
GTGTTCACCG CACTACTGCC GCTGCTGGTC ATCGGACTGA GCCTGGCCGT CGGGCGCGGC
GTACTGTCCG CGCTCGGCGA GATGGGTATG CCGGTGTCCC AATTCACCGT CGCGTTCATG
ACCGCGATCC TGCTCGGCGC CGGCACCGAC TACACCGTGT TCCTGATCAG CCGCTACCAC
GAGCAGCGCC GCGCACAGGT GCCGGCGGAT CAGGCCATCA TCCACGCCAC CGCCAGCATC
GGCCGCGTAA TCCTGGCCTC AGCAGCCACT GTCGCACTCG CCTTCCTGGC GATGGTGTTC
GCCCGCTTGA GTGTGTTCGC CGCCCTGGGC CCGGCGTGCG CCATCGCAGT TCTCTTCGGT
TTCCTGGCCA CAGTCACCCT GCTGCCACCA GTGCTGGCAC TGGCAGCTAA ACGTGGCATC
GGTGAACCCA AATCCGATCG CACCCGTCGC TACTGGAACA GTGTCGCCGT GGCGGTGGTG
CGCCGCCCGG TGCCGCTGCT GATCGTCAGC CTCGTCACCC TGCTCGCACT GTCCGCGGTA
GCCGTGACCA TCAAAATCAG CTACGACGAC CGCAAAGGCC AACCTGCCAC CACCGCCAGC
AACCAGGGCT ATCAGCTGCT GGACCGCCAC TTCCGAAAAG ACGTCGTCAT CACCGAATTC
CTCGTCGTCG AGAGCCCCAC CGACATGCGC ACCGGCAAGG GACTGGCCGA CCTCGACGAA
ATGGCGTCCC GCGTCTCCCA GGTTCCCGGT GTCACCAAAG TCTCGGGTGT CACCCGCCCC
ACCGGGGAAC GCCTCGATCA AGCGCAACTG GCCTGGCAAA ACGGTCAAAT TGGAGACAAG
ATGGCCGGCG CAGTCGCCGA CGGCAACGCC CGCCGAGACG ACCTCACGAA ACTCACCGAC
GGCGCCGATC AACTCGCCGG CGGACTGGCC CAACTCGACA CCACCGTGCG CACCGCCCTA
GCCCCCCTGG CGGGAATCCT CACTCAAGCC CAATCCGCTG GCACTCAGGT CAACCAGTTC
CGACCACTGC TGCAACAACT GTCAGCGACC GCCCCTGCGG TCGATCAGGC CATCCAATCC
GGCCCAGGAC TACGCCCCCT GGCCGACCAG GCACAACACG CGATCACCAC TTTGGAGCCG
CTCGTGGGTG CCCTCAACAC CTCGCCGTGG TGTGCCACCA CACCCCAATG CGCCCAGATC
CGCGACCAAG TACAGATCCT GATCACACTG CGCAACAGCG GATTCTTCAA CCAGATCGCC
GACCTCGGCG ACCGCTATGA CCCCGCCAGC AATGCCACCG TCGCCGGAAC ACTCACCAAC
GTCCAGAACG CCGTCACCTC GCTCGACAAG GCCTTCGGGG CCCTCGGAAA CCCCGCTGAC
CTGGCTGGCA ACCTGCGCCG CCTACAAGAC GGGATCGGCC AACTCGCCTC CGGCGCCCAA
GCGTTGGCCA CCGGTGTGCG CACCCTGGCC GACAGCAACA TCGACATGCT CTCCGGGATG
AGCCAGATCG CCACCCAGCT ACAAAACTCC GCACGCGCGG CCCAGGACTC CGACTCATCA
AGCGGTTTCT ACCTGCCCGC CAACGCCTTC GAGAACCGCC AATTCACCGA CGTCGCCAAG
CAATTCCTCT CACCCGACGG CAAAACAGCA CGGTTCATGA TCGAAACCAG CCACGACCCC
TACAGCGTCG AAGCCATGGA CCTCGCCAAC CGCATCACCA ACACCGCCAA CACCGCACGG
CCCAACACCT CGCTTTCTGA CGCCACCGTC TCTGTCGCCG GCTTCCCAGC CGTCAATTCC
GACATCCAAC GGCTCCTGTG GGCAGACTTC GCCCAACTGG CCCTCGCCAC CACCGTCATT
GTCGGCATCA TCCTGGTGCT GCTGCTGCGC GCACTACTGG CACCGATCTA TCTTCTCGGC
ACCGTCCTGC TCAACTACCT CGCCTCGATC GGATTCGGCG TCCTGGTATT CCAATGGATC
TTTGGGCAGG AAATCGCCTG GCCCGTACCA CTGTTGGCAT TCATTATCCT CGTCGCCGTC
GGAGCCGACT ACAACATGCT GCTCGTCTCC CGACTACGCG AAGAATCCGG AAGCAACATC
CGCGTCGGCG TGCTGCGCAC CGTCGCCAAC ACCGGCGCCG TCATCACCTC CGCCGGCCTC
ATCTTCGCCG TCAGCATGTT CGGCCTCATG GTTGGCTCGG TGGCCATCAT GATCCAAGCC
GGCCTCATCA TCGGATTCGG ACTACTGCTC GACACCTTCC TCGTACGCAC CCTCACCGTG
CCCGCCATCG CCACACTCCT ACGCGAAGCC AGCTGGTGGC CCACCAAACC AAACACCAGC
ACAACCTGA
|
|---|
| Protein sequence | MTDRTTGSST APAAPTRRRD SPSADPPHSR EYSARLAALG RFTVRHKALT IGVWIGAAII
LALLFPQLET VVRQQSVDLI PRDAPSLQTV ERMSTAFGEQ GSKTVLIVAM EDPAGLTPAA
QQRYDRLLER LRADSEHVLL VQDLLADPVT KTQAVSADGK SWYLPVGVTG TLGDPTAAES
VKAVRDITAE VFSDSTTTAH VTGPPATFSD MIASAEHDLL LISIATAGMI ALILLIVYRS
VFTALLPLLV IGLSLAVGRG VLSALGEMGM PVSQFTVAFM TAILLGAGTD YTVFLISRYH
EQRRAQVPAD QAIIHATASI GRVILASAAT VALAFLAMVF ARLSVFAALG PACAIAVLFG
FLATVTLLPP VLALAAKRGI GEPKSDRTRR YWNSVAVAVV RRPVPLLIVS LVTLLALSAV
AVTIKISYDD RKGQPATTAS NQGYQLLDRH FRKDVVITEF LVVESPTDMR TGKGLADLDE
MASRVSQVPG VTKVSGVTRP TGERLDQAQL AWQNGQIGDK MAGAVADGNA RRDDLTKLTD
GADQLAGGLA QLDTTVRTAL APLAGILTQA QSAGTQVNQF RPLLQQLSAT APAVDQAIQS
GPGLRPLADQ AQHAITTLEP LVGALNTSPW CATTPQCAQI RDQVQILITL RNSGFFNQIA
DLGDRYDPAS NATVAGTLTN VQNAVTSLDK AFGALGNPAD LAGNLRRLQD GIGQLASGAQ
ALATGVRTLA DSNIDMLSGM SQIATQLQNS ARAAQDSDSS SGFYLPANAF ENRQFTDVAK
QFLSPDGKTA RFMIETSHDP YSVEAMDLAN RITNTANTAR PNTSLSDATV SVAGFPAVNS
DIQRLLWADF AQLALATTVI VGIILVLLLR ALLAPIYLLG TVLLNYLASI GFGVLVFQWI
FGQEIAWPVP LLAFIILVAV GADYNMLLVS RLREESGSNI RVGVLRTVAN TGAVITSAGL
IFAVSMFGLM VGSVAIMIQA GLIIGFGLLL DTFLVRTLTV PAIATLLREA SWWPTKPNTS
TT
|
|---|
| |