| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4758 |
|---|
| Symbol | lysS |
|---|
| ID | 4113587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 5035062 |
|---|
| End bp | 5036600 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638033909 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_641918 |
|---|
| Protein GI | 108801721 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.38099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACACCGA CCGGCGGCGA CAACACGCCC GAGAACAACG CGCCCGATAA CGACCCTGAC
ATCCCCGAGC AGTTCCGCAT TCGTCAGGCC AAGCGGGAAC GTCTGCTGGC CGAGGGTCGC
GACCCCTACC CGGTGGACGT GGACCGCACG CACACGCTCG CCGAAGTGCG CGCCGCTTTC
CCCGACCTGC CGGTCGACTC GCAGACCGGC GAGATCGTCG GCGTCGCCGG GCGCGTCGTA
TTCGCCCGCA ACTCGGGGAA GCTGTGTTTC GCGACCTTGC AGGAGGGCGA CGGTACGCAA
CTACAGGCCA TGATCAGCCT GGCCGAGGTG GGGCAGGAAT CGCTCGACAG CTGGAAAGCC
GACGTCGACC TGGGTGACAT CGTGTCCGTC CACGGCCAGG TCATCAGTTC CCGTCGCGGT
GAGCTCTCTG TGCTCGCCGA TTCCTGGCAA ATCATCTCCA AGGCGCTGCG GCCGCTTCCG
GTCGCGCACA AGGAGATGAG CGAGGAGGCA CGGGTGCGGC AGCGCTACGT CGACCTCATC
GTGCGTCCGG AGGCCCGCAC CATCGCACGT CAACGCGTGG CCGTCGTGCG TGCGCTCCGC
AACGCGCTCG AGCGGCGCGG CTTCCTCGAA CTCGAGACGC CGATGCTGCA GACCCTGGCC
GGCGGTGCGG CGGCCAGGCC GTTCGTCACC CACTCCAATG CACTCGATGT GGACCTATAC
CTGCGTATCG CGCCGGAGCT GTTCCTCAAG CGTGCCCTGG TCGGTGGTTT CGAGAAGGTC
TTCGAGCTGA ATCGCAACTT CCGAAACGAA GGTATCGATT CCACGCATTC TCCCGAATTC
GCGATGCTGG AGACTTATCA GGCGTATGGC GACTACAACG ATTCCGCGGT CGTGACGCGG
GAACTAATTC AGGAAGTCGC CGACGAGGCG ATCGGGACCC GTCAAGTGCC ATTGGCGGAT
GGCACCGTGT ACGACCTGGA CGGTGAGTGG GAGTCGTTGG AAATGTACCC CTCGCTGTCC
GCGGCGCTGG GTGAGGAGAT CACCCCGCAG ACCCCCGCCG ACGAACTCTG GCGGATCGCC
GACCGGCTCG GTGTGGAGAT TCCCCGTGAC CGCGGATACG GCCACGGGAA ATTGATCGAG
GAACTGTGGG AGCACACCGT CGGCGAGGAT CTCTGGGCGC CGACCTTCGT GCGGGACTTC
CCGGTGGAGA CGACCCCGCT CACCCGGTCG CACCGCAGCG TTCCCGGCGT CACCGAGAAG
TGGGATCTCT ATGTCCGCAA GTTCGAGTTG GCGACCGGCT ATTCCGAACT CATCGATCCG
ATAATTCAGC GCGAGCGATT CGAGGAGCAG GCGCGAGCGG CCGCTGCCGG TGACGACGAG
GCAATGGTTC TCGACGAGGA TTTCCTGGCG GCATTGGAGT ACGGCATGCC GCCGTCCACC
GGTACCGGAA TGGGCATCGA CCGGTTGCTG ATGGCGCTGA CTGGACTGTC AATTAGAGAG
ACAATTCTCT TCCCGATTGT TCGGCGGCAC GGCGGCTGA
|
|---|
| Protein sequence | MTPTGGDNTP ENNAPDNDPD IPEQFRIRQA KRERLLAEGR DPYPVDVDRT HTLAEVRAAF
PDLPVDSQTG EIVGVAGRVV FARNSGKLCF ATLQEGDGTQ LQAMISLAEV GQESLDSWKA
DVDLGDIVSV HGQVISSRRG ELSVLADSWQ IISKALRPLP VAHKEMSEEA RVRQRYVDLI
VRPEARTIAR QRVAVVRALR NALERRGFLE LETPMLQTLA GGAAARPFVT HSNALDVDLY
LRIAPELFLK RALVGGFEKV FELNRNFRNE GIDSTHSPEF AMLETYQAYG DYNDSAVVTR
ELIQEVADEA IGTRQVPLAD GTVYDLDGEW ESLEMYPSLS AALGEEITPQ TPADELWRIA
DRLGVEIPRD RGYGHGKLIE ELWEHTVGED LWAPTFVRDF PVETTPLTRS HRSVPGVTEK
WDLYVRKFEL ATGYSELIDP IIQRERFEEQ ARAAAAGDDE AMVLDEDFLA ALEYGMPPST
GTGMGIDRLL MALTGLSIRE TILFPIVRRH GG
|
|---|
| |