Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4748 |
Symbol | |
ID | 4113577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 5026187 |
End bp | 5027167 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638033899 |
Product | transcriptional regulator |
Protein accession | YP_641908 |
Protein GI | 108801711 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.760248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTGA AAAGCGTATC GACACTGGTG CTCGACGGTC TAGCGGTTTT CGAGTTCGGC GTCATCTGCG AGGTCTTCGG TATCGACCGA TCGGCCGACG GCGTCCCCAA CTTCGACTTC AAGGTCTGCG GACCGGTGGC CGGTGAACCC GTGCGCACGA CGATCGGCGC GCACCTCACC CCGCAGCATG ACTTCGGCGA CCTGCTCGGT GCCGACCTGG TCGCAGTGCC CGCGATCGCC TCCGGGAAGA ACGGCTATCC GCGCGAGGCG CTGGAAGTGC TGCGCGAGGC GGCGGCGGGC GGATCGATCA TCCTGACGGT CTGCTCCGGG GCGTTCGTCG TCGGCGCCGC GGGTCTGCTC GACGGTCGGC CCTGTACGAC GCACTGGATG TACGCCGACC TGCTGGCGCG GATGTATCCG ACCGCGCGCG TCGACCGCAA TGTGCTGTTC GTCGACGACG GCAACCTGAT CACCAGTGCG GGAACTGCGG CCGGTATCGA CGCCTGTCTG CACCTGGTCC GGCGCGAACT GGGCAGCGAG GTCACCAACC GGATCGCCCG CCGGATGGTC GTACCACCGC AGCGCGACGG CGGCCAGCGG CAGTACATCG AACAGCCGAT CCCGGTCAGG TGCTCGGAAC GCTTTGCGCC GCATCTGGAT TGGATCGTGG CCAATCTCGA CAAACCGCAC ACCGTCAGCA CGCTGGCCCG GCGGGCCAAC ATGTCGGCGC GCACGTTCGC CCGTCGCTTC GTCGAGGAGA CCGGCACCAC GCCCATGCAG TGGGTGACCG ATCAGCGGGT GCTCTACGCG CGTCGGATGC TGGAGGAGAG CGATCTCGAC ATCGACCGCA TCGCCGAGCG GTCCGGCTTC GGTACGGCCA CCCTGCTGCG CCACCACTTC CGGCGCATCA TCGGTGTGAC GCCCACCGAC TACCGCAGGC GGTTCTGCTG CAACGACACC CAGGCGGAGC AGACCGCCTA G
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Protein sequence | MALKSVSTLV LDGLAVFEFG VICEVFGIDR SADGVPNFDF KVCGPVAGEP VRTTIGAHLT PQHDFGDLLG ADLVAVPAIA SGKNGYPREA LEVLREAAAG GSIILTVCSG AFVVGAAGLL DGRPCTTHWM YADLLARMYP TARVDRNVLF VDDGNLITSA GTAAGIDACL HLVRRELGSE VTNRIARRMV VPPQRDGGQR QYIEQPIPVR CSERFAPHLD WIVANLDKPH TVSTLARRAN MSARTFARRF VEETGTTPMQ WVTDQRVLYA RRMLEESDLD IDRIAERSGF GTATLLRHHF RRIIGVTPTD YRRRFCCNDT QAEQTA
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