Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4739 |
Symbol | ispD |
ID | 4113568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 5017134 |
End bp | 5017799 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638033890 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_641899 |
Protein GI | 108801702 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGG TGGCCGTTGT TCCGGCCGCG GGTTCCGGTC AACGGCTCGC GGCCGGCGCG CCCAAAGCGT TCGTGAATCT CGCCGGGCGG CCGATGCTCG AACGCGCCAT CGCCGGGTTA CGGAATTCCG GTGTGGTCGA CAGCATCGTG GTCGCCGTCC CACCGAGCCG CACCGACGAA GCCAAGCTGG TATTCGGCGG TGAGGCGTTG ATCGTCGCGG GCGGCGCCGA CCGCACCGAA TCGGTGAGAG CCGCGCTCGC CGCCGTCGGC GATGCCGACT ACGTGCTCGT TCACGACGCT GCGCGCGCAC TCACACCACC ATCGCTGGTG GCCCGTGTCG TGCGGGCGCT GGAAGCCGGG CACAGCGCGG TGGTGCCCGG GCTCCCGGTG GCCGACACGA TCAAGGCCGT CGACGCCAAC GGCGCCGTAC TCGGCACACC CGAGCGGGCC GGACTGCGCG CGATCCAGAC CCCGCAGGGT TTCCACATCG ACGTGCTGCG CCGCGCGTAC GCACGGGCGG GCGACGGCGG TTTCACCGAC GACGCGTCGA TGGTCGAGCA GGCCGGCGGG CAGGTGCAGG TCGTCGAGGG CGACCCACTG GCCTTCAAGA TCACCACCCC ACTCGACCTC GTGCTGGCCG AGGCGATCCT GGCGGGCGCC CGGTGA
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Protein sequence | MTTVAVVPAA GSGQRLAAGA PKAFVNLAGR PMLERAIAGL RNSGVVDSIV VAVPPSRTDE AKLVFGGEAL IVAGGADRTE SVRAALAAVG DADYVLVHDA ARALTPPSLV ARVVRALEAG HSAVVPGLPV ADTIKAVDAN GAVLGTPERA GLRAIQTPQG FHIDVLRRAY ARAGDGGFTD DASMVEQAGG QVQVVEGDPL AFKITTPLDL VLAEAILAGA R
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