Gene Mmcs_4714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4714 
Symbol 
ID4113543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4994891 
End bp4995661 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID638033865 
ProductHAD family hydrolase 
Protein accessionYP_641874 
Protein GI108801677 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGACG GCGTACCGAC AGATCTCCGC CAGGCGCTCG ACGGCGCCGC ACGACTTCCG 
CGTCTGCTGA TCGCCTGTGA CTATGACGGC ACGCTGGCGC CGATCGTGTC CAACCCCGCC
GACGCCCGTC CGCTGCCCGC GTCGGCGGCC GCGGTGGAGG AACTGGCTGC GCTGCCCGCC
ACCACGGTCG CGCTGATCTC CGGCCGCGCA CTGGGCGTGC TCAAGGAGCT CTCCGGGGTG
TCCGGCCGTG TGCACCTGGT CGGCAGCCAC GGAGCGGAGT TCGACACCGG GTTCCTGTCC
CCCATCGATG AGCGGGCCGA AGCACTGCTG GTCGAGATCA AACAGACCCT CGATGAGATC
GCCGCCGAAT ACGCCGGTGT GACAACCGAA CTCAAACCCG CCAGTGTCGC GCTGCACGTG
CGCAACGCCT CGACCGACGA CGGTGAAGCG GCGATGCACC GCGCGAACGA GGCGGCCGCG
CGGTGGGATG CGCAGGTCAC CGACGGCAAG GCGGTCAAGG AGTTCGCCGT CATCCAGACC
GACAAGGGAC AGGCCGTCGA CATCCTGCGC GATCAGCACG ACGCCTCGGC GGTGCTGTTC
CTCGGCGACG ACGTCACCGA CGAGAAGGCG TTCCGCCGGA TGCGCGACGG CGACATCGGT
GTGAAGGTCG GCCCCGGCGA CACCGCGGCG GCGTACCGGG TCGACGAACC CCGCGACGTG
GCCGAGGTGC TCGAGTACCT GCTGGCCGGG CGGCGTCGTG CTCACTCCTG A
 
Protein sequence
MADGVPTDLR QALDGAARLP RLLIACDYDG TLAPIVSNPA DARPLPASAA AVEELAALPA 
TTVALISGRA LGVLKELSGV SGRVHLVGSH GAEFDTGFLS PIDERAEALL VEIKQTLDEI
AAEYAGVTTE LKPASVALHV RNASTDDGEA AMHRANEAAA RWDAQVTDGK AVKEFAVIQT
DKGQAVDILR DQHDASAVLF LGDDVTDEKA FRRMRDGDIG VKVGPGDTAA AYRVDEPRDV
AEVLEYLLAG RRRAHS