Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4612 |
Symbol | |
ID | 4113441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4883830 |
End bp | 4885584 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638033763 |
Product | virulence factor MCE-like protein |
Protein accession | YP_641772 |
Protein GI | 108801575 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACCC GGCTGACCAA ACTGCAACTG TCGATCTTCG CCGTCGTCAC GGTCCTCACC GTCGGCGCGA TCTCGCTGTT CTATCTGCAC CTGCCTGCCG CGGTCGGCAT CGGGGCCTAC GACGTCACGG CCAAGTTCAC CGCCGGTGGT GGCCTCTACG AGAACGCCAA CGTCACCTAC CGGGGCGTGA CGGTCGGCCG GGTCGAGAAG GTGGGGCTGG CCGACGACGG GGTCGTCGCG CAGATGCGGC TCAACAGCGG CACCCCGGTG CCCGAGAACG TCACGGCCAC GGTCAAGAGC GTCTCGGCGA TCGGCGAGCA GTACATCGAC CTGGTGCCGC CGGAGAGGGC GTCGAAGTCG ATGCTGCGCG ACGGGGCGGA CATCGGGCTG AACCGCACCG CGATCGGTCA GGACATCTCC GGGCTGCTCG AAGAGGCCGA CCGGCTGGTC TCCAGCGTCG GCGACAGCCG GATCCAGGAC GTGCTGCGTG AGGCGTTCAA GGCGTTCAAC GGTTCCGGTC CCGAGCTGTC TCGGTTGATC CAGTCCTCGC GTCTGCTGGT CGACGAGGCC AACGCGAACT ACGACGAGGT CGCTCAGCTG ATCGATCAGG CCGGTCCGTT CCTCGACGCG CAGATCCGCA GCGGCGACGA CATCCGGTCG CTGGCGGACG GACTGGCCGA CGTCACCGGC AACGTGGCCG GGGCCGACGC GCAGCTGCGC GCGACCCTGG AGACGGTGCC CGGCACCACC GAGGCGGCCA ACACCACGTT CGAGGGGATC CGGCCCACCT TTCCGGTGCT GGCCGCCAAT CTGGCGAACT TCGGGCGCAT CGGGGTCATC TACCACAAGT CGCTCGAGCA GGCGCTGGTG ATCTTTCCGG CCCTGTTGGC CGCGCTGAAC ACCGTCGCGG GCGGGGTGCC GGCGGATGAA GGCGGCAAGC TGGACTTCAA GATCCACCTC AACGACCCAC CGACCTGTTC GGTCGGGTTC CTGCCGCCGA CGTCGATCCG CTCGCCGGCC GACACGACGC TGCGGGACCT GCCCAGGGAC CTGTACTGCA AGGCCCCGCA CAACGATCCG ACGGTCGTGC GCGGCGCCCG AAACTATCCG TGCATGGAGT TCCCGGGCAA GCGCGCGGCG ACCATTCAGC AGTGCCGGGA CCCCGAGGGG TTCGTGCCGA TCGGCAGCAA TCCGTGGCGT GGCCCGCCGG TGCCCATCGG CGAACCGATC CAGGATCCGC GAATGATCCT GCCGCAGAAC AAGTTCCCGT TCATCCCGCC GCAGGTCGAC CCCGATCCGG GGCCGCCGGT GGTGCAGCTT CCGCCGGGCG TGCAGCCGGG CCCGGGGCCG GCGCCACATG CGCCGTTCCC GCTGCCGGTG CCGCCGAACG ACCCGGGTGT TCCACCGCCG CTGCCGTACT ACGCGCCGCC GGACCAGTTG GTGCCGCCGT ACGGCCGACC GGCGCCCGCG CCACCGCCTC CTCCGCCGTC GCTGGCGCCG CCGCCACCGG CCGACGCTCC GCCGGTGCCC GCACCGGAAC CTGCGCCGGG TCCCGGCCCG CTGCCGGGTC GGTTGCCCGG TCCGTTGCCG GCGGAGGCCC CGATGGCCAG CGGTCCGACG ACGGCCACGT ACGACTCCAG GACGGGCGTG TTCGCCGATC CCGCCGGAGG GGTTGGCGTG TACGCCCCGG GAGCTGACAA ACTGGCGCCT GCGGAAAACT GGGCAGACCT GATGATGGCT CCAAGGCAGA TGTGA
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Protein sequence | MLTRLTKLQL SIFAVVTVLT VGAISLFYLH LPAAVGIGAY DVTAKFTAGG GLYENANVTY RGVTVGRVEK VGLADDGVVA QMRLNSGTPV PENVTATVKS VSAIGEQYID LVPPERASKS MLRDGADIGL NRTAIGQDIS GLLEEADRLV SSVGDSRIQD VLREAFKAFN GSGPELSRLI QSSRLLVDEA NANYDEVAQL IDQAGPFLDA QIRSGDDIRS LADGLADVTG NVAGADAQLR ATLETVPGTT EAANTTFEGI RPTFPVLAAN LANFGRIGVI YHKSLEQALV IFPALLAALN TVAGGVPADE GGKLDFKIHL NDPPTCSVGF LPPTSIRSPA DTTLRDLPRD LYCKAPHNDP TVVRGARNYP CMEFPGKRAA TIQQCRDPEG FVPIGSNPWR GPPVPIGEPI QDPRMILPQN KFPFIPPQVD PDPGPPVVQL PPGVQPGPGP APHAPFPLPV PPNDPGVPPP LPYYAPPDQL VPPYGRPAPA PPPPPPSLAP PPPADAPPVP APEPAPGPGP LPGRLPGPLP AEAPMASGPT TATYDSRTGV FADPAGGVGV YAPGADKLAP AENWADLMMA PRQM
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