| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4505 |
|---|
| Symbol | |
|---|
| ID | 4113334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4782328 |
|---|
| End bp | 4783890 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638033651 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_641665 |
|---|
| Protein GI | 108801468 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.145075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACT TCGACGTGGT CGTCATCGGC GCCGGGCACA ACGGGCTCAC CGCGGCGGCC
CTTCTGCAGC GGTCAGGACT GCGCACCGTC TGCCTGGAGG CCAAGCGGTA CGCCGGCGGG
ATGGCCTCGA CCGTCGAACT GTTCGACGGG TACCGCTTCG AGATCGCCGG CTCCCTGCAG
TTCCCGACGT CGGCGACGGT CAGCCGGGAA CTCGGCCTCG ACGAACTGCC CACCGTCGAC
CTCGAGGTGA TGTCGGTGTC GCTGCGCGGC GTCGGCGACG CCCCGGTCGT CTACTACACC
GATCCGATGC GGATGCTGAC CCACCTCGAC GAGGTGCACG GCGCCGACGC CGTCGCCGGG
ATGGCCGGTC TGATGGCGTG GAGTCAGGGG CCGACGCGGG CTCTCGGCCG GTTCGACGCC
GATCGCCCGC CCAGATCGCT CGACGAGATG TACGCCTGTG CCGCAACCCC GTTCGAACGC
GCCGCGATCA CCGACATGCT GTTCGGGTCG GTCAGCGACG TTCTGGACCG CTATCTGCCC
GACCGTGAGA AACACGGCGC GCTGCGCGGC ATGCTGGCGT TCCTCGCCGT CAACACCACC
TACCGCGGGC CCGCGACGCC GGGCAGTGCG GCGGCGCTGG CCTTCGGCCT GGCCGTGCCG
GACGAGAACG CCGCGCTGAT GAAGAAACTG CGCGGCGGGA TCGGCGCCCT CACCGACCAC
CTGTGCCGCC TGTTCACCGA GGCCGGCGGA GAGGTCCGGC TGCGCAGCAA GGTCGAGCGG
ATCGCGGTCG CCGACGGGCG CGTCTCCGGT GTCGCGCTCG AGGACGGGAC AACGCTCACC
GCGCACACGG TCGTCTCGGC CGTCGCCCCC GACCTCACCG TGACCGCACT GCTCGACCCC
GACGCCGTAA CCGCCGACCT CCGTGACCGC TTCGCACGCA TCGACCACCG GGGCAGCTAT
CTGCAGATGC ACTTCGCGCT GGACGCCGCC CCCACCTTCG CCGCACCGTA CGAGATGCTC
AACGATCCCG AGTTGCAGGC GGCCATTGGG CTGTTCAGCA CGCCGGAGGA GCTGCAGAGC
CAGTGGGAGG ACTGCCGGCG CGGTGTGGTG CCGGCCGACC CCGCGATCGC GCTGCAGATC
CCCTCGGCGC ACGATCCCAC GCTCGCGCTC CCCGGTAAGC ACGCCGCGTC GGCGTTCGCG
CTGTGGTTCC CCGTCGAGAC CGACCACGCC CGCTACGGGG AGATGAAGAC CGAGATGGGC
CGGCGGGTGA TCGAGAAGAT CACCCGCATC GCACCGGATT TCACCGACCT CATCACCCGG
CACACCACGT TCACCCCACG CCACATGGGG ACGATGTTCG GGGCGCCGGG CGGCGACTAC
TGCCATGGCC TGATCCACCC CGAGCAGATG GGCCCGAACC GGCCCGGCCC GAAAGGGTAT
GTGGATCAAC CGCTTCCGGT CGACGGCCTC TACCTGGCCA GTGCCGGATG CCACGGCGGG
CCGGGCATCA CGTTCATCCC CGGCTACAAC GCCGCGCGTC AGGCGCTGAC CGACCTGGGC
TGA
|
|---|
| Protein sequence | MPDFDVVVIG AGHNGLTAAA LLQRSGLRTV CLEAKRYAGG MASTVELFDG YRFEIAGSLQ
FPTSATVSRE LGLDELPTVD LEVMSVSLRG VGDAPVVYYT DPMRMLTHLD EVHGADAVAG
MAGLMAWSQG PTRALGRFDA DRPPRSLDEM YACAATPFER AAITDMLFGS VSDVLDRYLP
DREKHGALRG MLAFLAVNTT YRGPATPGSA AALAFGLAVP DENAALMKKL RGGIGALTDH
LCRLFTEAGG EVRLRSKVER IAVADGRVSG VALEDGTTLT AHTVVSAVAP DLTVTALLDP
DAVTADLRDR FARIDHRGSY LQMHFALDAA PTFAAPYEML NDPELQAAIG LFSTPEELQS
QWEDCRRGVV PADPAIALQI PSAHDPTLAL PGKHAASAFA LWFPVETDHA RYGEMKTEMG
RRVIEKITRI APDFTDLITR HTTFTPRHMG TMFGAPGGDY CHGLIHPEQM GPNRPGPKGY
VDQPLPVDGL YLASAGCHGG PGITFIPGYN AARQALTDLG
|
|---|
| |