Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4340 |
Symbol | |
ID | 4113170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4616352 |
End bp | 4618076 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638033486 |
Product | thiamine pyrophosphate enzyme-like TPP binding region |
Protein accession | YP_641501 |
Protein GI | 108801304 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0579862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATC TGGTTGCGGA TGCATTGGTG GCCCGGCTGC GCGACTGGGG CGCCGACCGG GTGTTCGGAT ATGCCGGCGA CGGGGTGAAC ACCCTCCTGG GTGCGTTACA ACGTTCGGGT GCACCGGAAT TCATCTCCAC CCGGCACGAG GAACTCGCGG CGTTCATGGC CTGCGGACAC GCCAAGTACA CCGGCCGGGT CGGCGTGTGC ATGGCCACCC AGGGCCCCGG CGCCATCCAT CTGCTGGCCG GCCTCTACGA CGCCAAGCTC GACAAGCGGC CCGTGGTGGC GATCGTCGGA CAGGTGGTCT CGACCGCGCT GGGCAGCGGC TACCTGCAGG AGGTCGACCT GCACACGCTC TTCAAAGACG TCTGCGGACA GTACGTGCAG ACGGTGTTCG CACCCGAGCA GGCGCTGATG GCGCTCGACA ACGCGATGCG GACCGCGATC GCGACGTCGA CACCGACCTG CCTGATCATC CCGCACGACG TGCAGCAGGC CGAGATGCCC GACGAACTCG CGCACAGCCA CGGCGTGGTG CCCTCGGCGG CGGTCAGCGC GCCGACCCGG ATCACCGCCC CCGACGACCA GATCCGCTCG GCCGCCGACA TACTCAACGC CGGTCGGCGG GTGGCGTTGC TCGTGGGTCG CGGCGCCGCC GGTGCGGCCG ACGAGATCGC CCGCGTGGTC GAGACACTCG GGGCCGGGGT GACGACGTCA CTGCTCGGCA AGCCGGTGCT CGACGAGGGG CAGCCGTGGC ACACCGGCGT GATGGGTCAC CTCGGCACCA CCGCGAGCGC CGAGCTGATG GCGAACTGCG ACACCCTGCT GATCGTCGGC TCCAACGATC CCTGGACGGA GTTCTACCCC GCACCCGGAC AGGCCAAGGC CGTGCAGATC GACATCCAGC CGCGGGTCAT CGGTGCGAAG TATCCCGTCG ACGCACCCGT CGTCGGGCAA GCGGCACAGG CACTTTCGGC TCTCTCAGCG CTGCTCGAAC CCAAACCGGA CCGGGCCTGG CAGGAGCAGG TCCGCCAGTG GCGTGAGCAG TGGCACGCCG AGGCCGCGCG CCGGGCCGCC GCCGAGACCT CCGACGCCAA CCCCGAGGCC GTGGTGCGGG CACTGTCAGA CCATCTGCCC GCCGACGCGC GCGTCGCCGT CGACACCGGA TCGTCGACCT ACTGGTATGC GCGACACCTC CGGTTGCCGC CGGGCGTACC CGCCCACCAC TCGGGCTATC TCGCGTCGAT GGGATGCGCG CTGCCCTACG GGGTGGCCGC GAAACTCGAT GCGCCACAAC GGCCGGTGGT GGCGCTGGTC GGTGACGGGG CGATGCAGAT GAGCGGACTG CTCGAACTCG TCACGATCGC CGACCGGTGG CGCTCGTGGC AGGATCCGCG GTTCGTGGTG CTGGTGCTGC ACAACGCCGA CCTGACCGAG GTGTCGTGGG AGCAGCGGGA GATGGAGGGC AACCCGCGCT TCGCCCCGTC GCAGGACGTG CCGCGGTTCC CGTACGCCGG CTACGCCGAA CTGCTCGGAC TGCGGGGTAT CCGGGTGACC TCGTCGCAGG AGGCCGACGA CGCCTGGGCG ACGGCGTTCT CCGCCGACCG GCCGACGGTC ATCGAGGCGG TGGTCGACGC CGCCACCCCG CTGCTGCCAC CGCTGATGCC GGACAGCAAG GCCGACAAGG TGCGGGCGGC GCTCGAACAG GAGGCCCGAA CGTGA
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Protein sequence | MTDLVADALV ARLRDWGADR VFGYAGDGVN TLLGALQRSG APEFISTRHE ELAAFMACGH AKYTGRVGVC MATQGPGAIH LLAGLYDAKL DKRPVVAIVG QVVSTALGSG YLQEVDLHTL FKDVCGQYVQ TVFAPEQALM ALDNAMRTAI ATSTPTCLII PHDVQQAEMP DELAHSHGVV PSAAVSAPTR ITAPDDQIRS AADILNAGRR VALLVGRGAA GAADEIARVV ETLGAGVTTS LLGKPVLDEG QPWHTGVMGH LGTTASAELM ANCDTLLIVG SNDPWTEFYP APGQAKAVQI DIQPRVIGAK YPVDAPVVGQ AAQALSALSA LLEPKPDRAW QEQVRQWREQ WHAEAARRAA AETSDANPEA VVRALSDHLP ADARVAVDTG SSTYWYARHL RLPPGVPAHH SGYLASMGCA LPYGVAAKLD APQRPVVALV GDGAMQMSGL LELVTIADRW RSWQDPRFVV LVLHNADLTE VSWEQREMEG NPRFAPSQDV PRFPYAGYAE LLGLRGIRVT SSQEADDAWA TAFSADRPTV IEAVVDAATP LLPPLMPDSK ADKVRAALEQ EART
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