Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4179 |
Symbol | |
ID | 4113009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4443016 |
End bp | 4444062 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638033322 |
Product | hypothetical protein |
Protein accession | YP_641340 |
Protein GI | 108801143 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.21546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA TTTTCACGCG TAGGAAACCC CCCGTAGCCG CCCCGAAGGT TACGGCTATG ACCGCACAGG ATCCGCAGGT CGCGGTGCTC GACGTGGCTG CACTGCCGCG CGGACCGGTC GGCGACCTCG CCGTCGACAG CGCATCCGGT TTCGTGGTCA CGACCAACCC CGCGGACCGT TCGATCACCG TGTTCGACGC CGACACCCTC GGCTCGGCCA GGGTGGTGGC GGTGGGCGGC ACCCCCGGCC TCGTCGCCGT CGCCGAGGAC CGCGCCTACG TCACCACGTC CTCGCTGCAC GACGATGCGG TCACCGTGGT CGACACGCGG GTGGGCACCG TCATCGCGCG CTACCCGCTC GCCTTCACGG CCACGGCGAT GACCATCAGC CCCGACGGCA AGCGCGTGTA CATCGGCCGC ACCGGTGACC AGGACGTCGA CGTCGCGGTG CTCGACACGG CGGCGGAACG TTTCGGCACC ATCGGCATCG GCTACCGGCC CGGGACCACC GTGGACGCCG TCCGGGTCGA CGCCGCGGGC CGTCGGCTGT ACGTGGCCAC GACGGGTCTG GCGGGCAGCG CCCTGCTCAC CGTCGACATC GAGACCGCTC GCGTGGTGCG CCGGTTGCGG CTGCCGTCGC CGATCCGCGA TCTCGCCCTC GGGCGCGACG GGCTGGCCTA CGTGCTGCGC TCCGACCGCC GCTACGGCGG CAGCATCGAC GTCATCGACC TCGGTGCCAA CGTGGTCATC GACTCGGTCG CCATCGGCGG CGCGCCCACG CAGCTGACCG TCAGCCCCGA CGGTTCGCGT GCCTACGTCG TGGACTACGA CCGGGTGGCC GTGTTCGACG CGATGACCAG TGAGGTCGTG GACGAGATCA CCGGTGAGGG ATCCCCGGCG TGCGTGGCCG TGCGTGAGGA CGGCCGCCGG ATCTACGTCG CCGACCACGC CGGCGCCATG ACGTCACTCG CCACGCCCCG GAAGCATTTC GCGGCGACCG ATCCGATCGT CCGGCCCGAC ATGCGGGAAC TGTCGCCCGC CGTCTAA
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Protein sequence | MANIFTRRKP PVAAPKVTAM TAQDPQVAVL DVAALPRGPV GDLAVDSASG FVVTTNPADR SITVFDADTL GSARVVAVGG TPGLVAVAED RAYVTTSSLH DDAVTVVDTR VGTVIARYPL AFTATAMTIS PDGKRVYIGR TGDQDVDVAV LDTAAERFGT IGIGYRPGTT VDAVRVDAAG RRLYVATTGL AGSALLTVDI ETARVVRRLR LPSPIRDLAL GRDGLAYVLR SDRRYGGSID VIDLGANVVI DSVAIGGAPT QLTVSPDGSR AYVVDYDRVA VFDAMTSEVV DEITGEGSPA CVAVREDGRR IYVADHAGAM TSLATPRKHF AATDPIVRPD MRELSPAV
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