Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4055 |
Symbol | |
ID | 4112885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4325259 |
End bp | 4326884 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638033198 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_641216 |
Protein GI | 108801019 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.647451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGTGC TCGCCGCCGA GACCATCGGC AACCCCGTCG CCAACATGTC GATCTTCGCC CTGTTCGTCC TGGTGACGCT CTTCATCGTC ATCAAGGCGA GTAAGAAGAA CGCCACCGCC ACCGAGTTCT TCACCGCGGG CCGCGCCTTC ACCGGTCCGC AGAACGGCAT CGCGATCAGC GGTGACTACC TGTCGGCCGC GAGCTTCCTC GGCATCGCCG GCGCCATCGC CGTCTACGGC TACGACGGGT TCCTGTACTC GATCGGATTC CTGGTCGCCT GGCTGGTGGC GCTGCTGCTG GTCGCCGAAC TGCTGCGCAA CACGGGAAAA TTCACCATGG CCGACGTGCT GAGCTTCCGG CTCAAACAAC GTCCGGTGCG GTTGGCCGCG GCCACCAACA CCCTGGCGGT GTCGTTGTTC TACCTGCTCG CCCAGATGGC CGGCGCCGGC GTGCTGGTCG CACTGCTGCT CAACATCGAA AGCGACCTCG GACAGTCGAT CGTGATCGCC GTCGTGGGCG TGCTGATGAT CGTCTACGTC CTGGTCGGCG GGATGAAGGG CACCACCTGG GTGCAGATCA TCAAGGCGGT CCTGCTGATC GGCGGCGCGG GGATCATGAC GATCATGGTG CTGGCGAAGT TCAACTTCAA CTTCTCCGAG ATCCTCGGCA GCGCACAGGC GATGGTGAGC AGCAGCGAGG ACGCCAAGGT CGCCTCGCGC GACGTGCTTG CCCCCGGCGC GCAGTACGGC GCGTCGCTGA CCACGCAGAT CAACTTCATC TCGCTGGCGC TGGCCCTGGT GCTCGGCACC GCCGGCCTGC CGCACGTGCT GATGCGCTTC TACACGGTGC CCACCGCCAA GGAGGCCCGC CGGTCGGTGG TCTGGGCGAT CGCGCTCATC GGCGCGTTCT ACCTGTTCAC CCTGGCCCTG GGTTACGGCG CCGCGGCCCT GGTCGGACCC GACCGCATCC TGGCCGCCCC CGGTGGCGTG AATTCCGCTG CGCCGCAACT GGCGTTCGAA CTCGGCGGCG TAGTGCTGCT GGGCGTCATC TCCGCGGTGG CGTTCGCGAC GATCCTCGCG GTCGTCGCCG GTCTGACCAT CACCGCGTCG GCGTCCTTCG CGCACGACAT CTACGCCAGC GTGATGAAGA GCCATCAGGT CACCGAGAGC GAGCAGGTCA AGATCTCGCG GATCACCGCG GTGGTGCTGG GCACGCTGGC GATCGGGTTG GGCATCCTGG CCCGCGAGCA GAACGTCGCG TTCCTGGTGG CGCTCGCGTT CGCGGTGGCC GCCGCGGCGA ATCTGCCGAC CATCCTCTAC TCGCTGTACT GGCGGCGTTT CAACACCCGC GGTGCGCTGT GGAGCATGTA CGGCGGGTTG ATCTCGACGA TCGTGCTGAT CGTATTCTCG CCCGCGGTCT CGGGCACGGC GACCTCGATG ATCAAGGGCG CCGACTTCGC CTGGTTCCCG CTGGCCAACC CGGGCATCGT GTCGATCCCG CTGGCGTTCA TCCTCGGCAT CGTCGGCACC CTGACCTCAC CAGACGACGA GGATCCGACG ATCGCCGCCG AGATGGAGGT GCGCTCGCTG ACCGGGGTGG GTGCGGAAAA GGCCGTCTCG CACTGA
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Protein sequence | MTVLAAETIG NPVANMSIFA LFVLVTLFIV IKASKKNATA TEFFTAGRAF TGPQNGIAIS GDYLSAASFL GIAGAIAVYG YDGFLYSIGF LVAWLVALLL VAELLRNTGK FTMADVLSFR LKQRPVRLAA ATNTLAVSLF YLLAQMAGAG VLVALLLNIE SDLGQSIVIA VVGVLMIVYV LVGGMKGTTW VQIIKAVLLI GGAGIMTIMV LAKFNFNFSE ILGSAQAMVS SSEDAKVASR DVLAPGAQYG ASLTTQINFI SLALALVLGT AGLPHVLMRF YTVPTAKEAR RSVVWAIALI GAFYLFTLAL GYGAAALVGP DRILAAPGGV NSAAPQLAFE LGGVVLLGVI SAVAFATILA VVAGLTITAS ASFAHDIYAS VMKSHQVTES EQVKISRITA VVLGTLAIGL GILAREQNVA FLVALAFAVA AAANLPTILY SLYWRRFNTR GALWSMYGGL ISTIVLIVFS PAVSGTATSM IKGADFAWFP LANPGIVSIP LAFILGIVGT LTSPDDEDPT IAAEMEVRSL TGVGAEKAVS H
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