Gene Mmcs_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3975 
Symbol 
ID4112805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4241555 
End bp4242385 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID638033118 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_641136 
Protein GI108800939 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGCT TCGCCGGAAA AGTCGCCGTG GTGACGGGCG CCGGATCGGG AATCGGGCAG 
GCGCTGGCGA TCGAGTTGGC CCGTTCCGGG GCCAGCGTCG CGATCAGCGA CGTCAACCTC
GAGGGCCTGG CCGTCACCGA GGAGCGCATC AAGGCGATCG GCGCACCCGT GAAGTGCGAC
CGCCTCGACG TCACCGAGCG TGAGGCGTTC CTGCTCTACG CCGACGAGGT CAAGGAACAC
TTCGGCAAGG TCAACCAGAT CTACAACAAC GCCGGCATCG CGTTCACCGG CGACATCGAG
ATCAGCCAGT TCAAGGACAT CGAACGGGTG ATGGACGTCG ACTTCTGGGG CGTCGTGAAC
GGCACCAAGG CGTTCCTGCC GCACCTGATC GCCTCCGGCG ACGGGCACGT CGTCAACGTC
TCCAGCGTGT TCGGCCTGTT CGCGGTGCCC GGCCAGGGTG CCTACAACGC GGCCAAGTTC
GCGGTGCGCG GTTTCACCGA GGCACTCAAC CAGGAGATGA CCGCGGCGGG CCACCCGGTC
AAGGTGACCA CCGTGCACCC CGGCGGCATC AAGACCGCGA TCGCCCGCAA CGCCACCGCC
GCGGAGGGCC TCGATCCCGA GGAACTGGCC AAGCTGTTCG ACAAGAAGCT CGCGAACACC
ACCCCCGAGC GGGCCGCGCA GGTCATCCTC GACGGCGTCC GCAAGAACAA GGCGCGGGTG
CTGATCGGCA CCGACGCCAA GGTGCTCGAC GCGGTCATCC GGGTCGTCGG GCCGCACTAT
CAGCGGTTGT TCACCTCGGT GACGTCGAAG CTGCTGCCCC GCCCCCACTG A
 
Protein sequence
MQGFAGKVAV VTGAGSGIGQ ALAIELARSG ASVAISDVNL EGLAVTEERI KAIGAPVKCD 
RLDVTEREAF LLYADEVKEH FGKVNQIYNN AGIAFTGDIE ISQFKDIERV MDVDFWGVVN
GTKAFLPHLI ASGDGHVVNV SSVFGLFAVP GQGAYNAAKF AVRGFTEALN QEMTAAGHPV
KVTTVHPGGI KTAIARNATA AEGLDPEELA KLFDKKLANT TPERAAQVIL DGVRKNKARV
LIGTDAKVLD AVIRVVGPHY QRLFTSVTSK LLPRPH