Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3942 |
Symbol | |
ID | 4112772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4201911 |
End bp | 4204076 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638033085 |
Product | formate dehydrogenase |
Protein accession | YP_641103 |
Protein GI | 108800906 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGCA CCACCGTGCA CACCTTCTGC CATTACTGTC TGGCGTCGTG CGGGGTCGAG GTGACCGTCG AGGACAACCG GGTCCGCAAG ATCTCCGCCG ACCGGCTCAA CCCGCACAGC TGGCACGACT TCTGCGCGAA GGGGCGCACC GCGGCGGAAC TCGTCGACCA CCCCCGCCGG ATCCGCGCGC CGATGCGGCG GGTCGGTGAC CGCTACGTCG AGGCGACCTG GGACGAGGCG ATCACCGACA TCGCCGCGCG GATGAACGCG GCGATCGAGG CCGACGGCCC CGACGCGGTC GGCGCCTACT ACGGCAACCC GACCGGGTTC TCGGGGTCCA ACGTCATCTT CATGAACGCC TGGCTCGACG CCGTCGGCAC CCACAACCGC TACTTCGTCG GCTCGGTCGA CCAGAACGCG ATGCACGTCG TCGCCGAGGC GATGTACGGC TCGATGCTGA TGGCGCCGGT GTCCGACATC GACAACTGTG ACTACTTCCT GCTCGTCGGC ACGAATCCCG CTGTGAGTGC GTGGAATTGG CTGGAGACGG TGCCCGGCGG GTGGCGGCGG GCGCTGGAGC GCCAGAAGCG GGGCGCGACG CTGGTGGTGG TCGACCCGGT CCGCACCGAG AGTGCCGACC ATGCCGATGT GCACCTCGCG ATCCGGCCGG GTCAGGACTG GGCGCTGCTG CTGGCGATGG TGAAAGTCGT TCTGGACGAA GGGCTCGAGC ACCGCGGCGA CTGCACCGAC CTCGCGGTCG GGGTGCCCGA GCTGCGCAGC CTGGTCGCCG AGGCCGACCT GGACGACCTC GCACAACGCT GCGGTGTCGA CCGCGCGACG ATCGAACGGG TGGCGCGCGA CTTCGCGGCG GCCCGGGGCG CGATGGTGGT GACCCGCACC GGGGTGTCGC TGCACGCGGC GGGCACGGTC GCCGAATGGC TCGGCCACGT GCTCAACGTC ATCACCGGCC GGATGGACCG GCCCGGCGGA CGGCGATTCG AACCTGGCTA TGTCGACGCG CTGCGACTCG CCGCGCTGGC GAAGGGCAAA CCGCATGTGA GCCGGGTGGC CGGGCGTGAG ATGGTCTCGG GCGCACACGC TTTGGCGGAG CTCCCGGACG AGATCACCAC ACCCGGGCCG GGGCAGATCA AGGCCATACT GATCAACTGC GGCAACCCGG TGGTGTCCGG TCCGGACGGC GCCAAGCTCG ACCGGGCACT GGCCACGCTC GACCTGCTGG TCGTGATCGA CCTGGTGCAG CGCGAAAGCC ACCGCCACGC GCACTGGCTG CTGCCCGCCG CGCACTGGCT CGAACGCGAC GATCTGCTGG CGTTCACCAG CAGCATGCAC GACGAGCCGT TCGTGCAGTA CGGGCGCCGT GCCGTCGAAC CCCCGCCGGG CGCCCGCGAG GAATGGCAGA TCTTCACGGA CCTGGCGCTC GCGATGGGCC TGCCCCTGTT CGGCGTGCGG GGAATGAACG GTTTCGTGCG GGCCACCCGG CGGGCCGCCG CGCTGACCCG CCGTCCCGCA CTGGCGTTCG GGCCGCAGTG GCTCAATCGC ATCCTGGTGG CGACCTCACG AAAGGTCAAC GGCCGCAAGT TACGTTGGCG CGACGTGGCG AACAGTCCGC ACGGGCTGGT GCTGGGGCCG CGCGAGTTCG GGCACTTCCG CGACGCGCTG CGCACGCCCG ACAAGAAGGT GCACGCCGCC CCGCCGGAGT TCGTGACGCG GACGCGCGAA CTGCTCGCCG CACCGCATCC GTCGGCGCCG GCCGGCTATC CGTTCCAACT CGGCAACCGC CGTCACCGCC ACTCGATGAA CTCCTGGCTC AACGACCTGC CGGGGCTGCA TCCGGGCGGT AAACGCAATG AGGTGGTCAT CCATCCCGAG GACGCGGCAG CGTTGGGTGT GGCCGACGGC GACCGGGTGC GGGTCTTCTC CCCCGTCGGC GCCGTCGAGG TGCATGCCAC GGTCAGCGAC CAGCCGCGCC GCGGCCTGGT GGTCCTCGAC CATGGCTGGG GCTCAAGGGT TTTCGACCCG CGCGGGGATG CGGAACCGCA GTCCTACGGC GTCAACCGCA ACCTGCTCGT CGACGGCACA GGACTCGATC CACTGTCGCA GACCTCGACG CTGAGCGAGG CGTGGGTCGG GGTGCAGAAG GTCTAG
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Protein sequence | MPSTTVHTFC HYCLASCGVE VTVEDNRVRK ISADRLNPHS WHDFCAKGRT AAELVDHPRR IRAPMRRVGD RYVEATWDEA ITDIAARMNA AIEADGPDAV GAYYGNPTGF SGSNVIFMNA WLDAVGTHNR YFVGSVDQNA MHVVAEAMYG SMLMAPVSDI DNCDYFLLVG TNPAVSAWNW LETVPGGWRR ALERQKRGAT LVVVDPVRTE SADHADVHLA IRPGQDWALL LAMVKVVLDE GLEHRGDCTD LAVGVPELRS LVAEADLDDL AQRCGVDRAT IERVARDFAA ARGAMVVTRT GVSLHAAGTV AEWLGHVLNV ITGRMDRPGG RRFEPGYVDA LRLAALAKGK PHVSRVAGRE MVSGAHALAE LPDEITTPGP GQIKAILINC GNPVVSGPDG AKLDRALATL DLLVVIDLVQ RESHRHAHWL LPAAHWLERD DLLAFTSSMH DEPFVQYGRR AVEPPPGARE EWQIFTDLAL AMGLPLFGVR GMNGFVRATR RAAALTRRPA LAFGPQWLNR ILVATSRKVN GRKLRWRDVA NSPHGLVLGP REFGHFRDAL RTPDKKVHAA PPEFVTRTRE LLAAPHPSAP AGYPFQLGNR RHRHSMNSWL NDLPGLHPGG KRNEVVIHPE DAAALGVADG DRVRVFSPVG AVEVHATVSD QPRRGLVVLD HGWGSRVFDP RGDAEPQSYG VNRNLLVDGT GLDPLSQTST LSEAWVGVQK V
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