Gene Mmcs_3941 details

Gene Information

• Locus tag: Mmcs_3941
• ID: 4112771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 4199998
• End bp: 4201893
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638033084
• Product: ABC transporter, transmembrane region
• Protein accession: YP_641102
• Protein GI: 108800905
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGGCC CCATGCGCGG TCTGCCGCAG GCGCCGGCCG AACGCACCCG CGACTTCAAG 
GGCTCCGCCC TGCGCCTGGT CCGGCGGCTC ACCCCGCAGC GCACACTCAC CGCGTCGGTG 
ATCGGCCTCG GCGTGGCGGG TATCGCGCTC GGGGTGCTGG GCCCGCGGAT CCTCGGACAC 
GCGACGGATC TGTTGTTCAA CGGCGTGATC GGCCGTCAGC TGCCCGCGGG GCTGACCAAG 
GAGCAGGCCG TCGAGGCGGC CCGGGCCCGC GGGGACTCGA CCTTCGCCGA CCTGCTGTCG 
GGGATGGCGG TGGTTCCCGG ACAGGGTGTG GACTTCGGTG CCGTCGCCCG CACGCTGGCC 
CTGGCGCTGG GCCTGTATCT CGTTGCGGCG CTTCTGGTGT GGATCCAGGC CCGGCTGCTG 
AACGTCGTCG TGCAACGCAC CATGGTGCGG TTGCGCGCCG ACGTCGAGGA CAAGGTGCAC 
CGGCTGCCGC TGTCGTACTT CGACACCCGC CAGCGCGGTG AGGTGCTCAG CCGCGTCACC 
AACGACGTCG ACAACATCCA GACCTCGCTG ACGATCACCA TCAGCCAATT GCTGACCTCG 
GTGCTGACGA TCGTCGCGGT GTTGGTGATG ATGTTGACGA TCTCACCGCT GCTGGCCCTG 
CTCACCGTGC TGACCGTGCC GCTGTCGCTG CTGGCGATCC GCTGGATCAC CCGGCGCAGC 
CAACGGTTGT TCGTCGCGCA GTGGCGCAAC ACCGGCCGGC TCAACGCCCA CATCGAGGAG 
ACCTACAGCG GTTTCACGAT CGTCAAGACG TTCGGCCACC GCGCCGCCGC CCAGGAGAAG 
TTCCGCGGGC TCAACGACGA GGTCTACCAG TCGAGCTTCG GCGCCCAGTT CTTCTCGGGT 
CTGGTCTCCC CGGCGACGGG GTTCATCGGC AACCTCAGCT ATGTGGCGGT CGCCGTCGTC 
GGTGGCCTCC AGGTGGCAGG AGGGCAGATC ACGCTCGGCA ACATCCAGGC GTTCATCCAG 
TACGTCCGCC AGTTCAACCA GCCGCTGGGC CAGGTCGCCG GCATGTACAA CACGCTGCAG 
TCGGGCATCG CCAGCGCCGA ACGCGTCTTC GACCTCCTCG ACGCCGAGGA GGAGTCCGCC 
GATCCGATGC GGGACCTGCC CGCCAGCGGG CGCACCGGAC CGGGCCGGGT GGAGTTCGAC 
CACGTGCACT TCGCCTACAC GGCAGGCACA CCGGTCATCG AGGACCTGTC GCTGGTGGCC 
GAACCGGGTA GCACGGTGGC CATCGTCGGG CCGACCGGTG CGGGCAAGAC CACGCTGGTG 
AATCTGCTGA TGCGGTTCTA CGACGTCGAT TCCGGGCGCA TTCTGATCGA CGGCGTCGAC 
ATCGCCGCGG TCAGCCGCCA CTCCCTGCGC TCACGGATCG GCATGGTGCT GCAGGACACC 
TGGCTGTTCG CCGGCACGAT CTACGACAAC ATCGCCTACG GCCGACCCGA CGCGACCGAG 
GACGAGGTGA TCGAGGCGGC CAAGACCGCG CACGTCGACC GCTTCGTACA CACACTGCCC 
GACGGGTACG CCACCAACGT CAGCGACGAC GGTGGCTCCA TCAGCGCAGG TGAGAAACAG 
CTGATCACGA TCGCCCGCGC GGTGCTGGCC CAGCCGCAGC TGCTGGTACT CGACGAGGCG 
ACCAGTTCGG TGGACACCCG CACCGAACTG CTCATCCAGC AGGCGATGGC CGAACTGCGC 
CGCGACCGCA CGAGTTTCAT CATCGCCCAC CGGCTGTCGA CCATCCGCGA CGCCGACCTG 
ATCCTGGTCA TGGAGGCGGG CCGCATCGTC GAACGCGGAA CGCACGAGGA ACTCGTCGCC 
TCGCGTGGCG AATACTGGTC CATGACACAG GTCTGA 

 

Protein sequence

MGGPMRGLPQ APAERTRDFK GSALRLVRRL TPQRTLTASV IGLGVAGIAL GVLGPRILGH 
ATDLLFNGVI GRQLPAGLTK EQAVEAARAR GDSTFADLLS GMAVVPGQGV DFGAVARTLA 
LALGLYLVAA LLVWIQARLL NVVVQRTMVR LRADVEDKVH RLPLSYFDTR QRGEVLSRVT 
NDVDNIQTSL TITISQLLTS VLTIVAVLVM MLTISPLLAL LTVLTVPLSL LAIRWITRRS 
QRLFVAQWRN TGRLNAHIEE TYSGFTIVKT FGHRAAAQEK FRGLNDEVYQ SSFGAQFFSG 
LVSPATGFIG NLSYVAVAVV GGLQVAGGQI TLGNIQAFIQ YVRQFNQPLG QVAGMYNTLQ 
SGIASAERVF DLLDAEEESA DPMRDLPASG RTGPGRVEFD HVHFAYTAGT PVIEDLSLVA 
EPGSTVAIVG PTGAGKTTLV NLLMRFYDVD SGRILIDGVD IAAVSRHSLR SRIGMVLQDT 
WLFAGTIYDN IAYGRPDATE DEVIEAAKTA HVDRFVHTLP DGYATNVSDD GGSISAGEKQ 
LITIARAVLA QPQLLVLDEA TSSVDTRTEL LIQQAMAELR RDRTSFIIAH RLSTIRDADL 
ILVMEAGRIV ERGTHEELVA SRGEYWSMTQ V