Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3855 |
Symbol | |
ID | 4112685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4098098 |
End bp | 4100095 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638032994 |
Product | helicase c2 |
Protein accession | YP_641016 |
Protein GI | 108800819 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.210682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCACGG GTAACGACGA CGCCGGCGAA CGCGTCACCG ATCTGTTGGC CGCGGCCGTC GCTGCGGTGG GCGGTGCCGA GCGGCCCGGT CAGGTCGAGA TGGCCAGGGC CGTGGCGACG GCGTTCGACA CCGGCCGGCA CCTCGCGGTG CAGGCCGGCA CCGGCACCGG CAAGTCGCTG GCCTATCTCG TGCCCGCGAT CGCCCACGCG ATCGCCGTCG ACGAACCGGT CGTGGTGTCG ACCGCCACGA TCGCCCTGCA GCGCCAGCTC GTCGACCGCG ACCTGCCCCG CCTCGCCGAC GCCCTGAGCG GGTCGCTGCC GCGCCGACCG CAGTTCGCGT TGCTCAAGGG CCGCGGAAAC TACCTGTGTC TCAACAAGAT TCACAACGGG AGCACCGGAA TCGGCGACGC CCCCGACGAC CGGCCCCAGG AGGAGCTCTT CGACGCGGTC GCGGCCACCG CCCTGGGCCG AGACGTGCAG CGGCTGACCA AGTGGGCGTC GGACACCGAG ACCGGTGACC GCGACGAACT GCGACCCGGC GTCCCCGAGC GGTCGTGGCG TCAGGTCAGC GTGTCGGCGC GGGAGTGCAT CGGCGTCTCC CGATGCCCGT ACGGCACCGA CTGCTTCGCC GAGAAGGCCC GCGAGAAGGC GGCCGACGTG GACGTGGTGG TGACCAACCA CGCGCTGCTG GCGATCGATG CGATCTCCGA TGCCGCGGTG CTGCCCGAAC ACAGCGCGGT GGTGATCGAC GAGGCGCACG AACTGGCCGA CCGGGTGACG TCGGTGGCGA CCGGTGAGCT CTCGGCGACC TCGCTGGGCA TCGCCCACCG CCGGGTGGCG CGGCTGGTCG AGGGTGAGCT CGCGGATCGG CTGGAGGCCG CCGTCGCCAC CGTGTCGTCG GCCATCCACG ACGGCACGCC CGGACGCATC GACCGCCTCG ACGACGAGCT GGCCACCTAC CTGACCGCGC TGCGCGACGC GGCCGACCGG GCCCGGTCGG CGATCGACAC CGCACCGAGC GATCCGAAGG CCGCCGCCGC GCGCACCGAG GCGGTGACCG CGCTGAGCGA TGTCAGCGAC ACCGCCAACC GGATCCTGGA CTCCTTCGTT CCCGCCATCC CCGACCGCGT CGACGTCGTG TGGCTGGACC ACGAGGGCGG CGGCGCCGGT TCGGTCAGCG CGATCCTGCG GGTGGCGCCG CTGTCGGTGG CCGGGCTGCT GCGCACCCGG CTGTTCGAGC ACGCGACCAC CGTGCTGACG TCGGCGACGC TGACCGTGGG CGGCAACTTC GAGGCGATGG CCCGGGCCTG GGGGCTGGCC GACACCAAGT GGCACGGACT CGACGTCGGC TCACCGTTCG ACCATGCCAA GGCCGGGATC CTCTACGTCG CCGCCCACCT CCCGCCGCCC GGCCGCGACG GCACCGGTTC GGCCGAACAG CTCAAGGAGA TCGAGGCCCT GATCACCGCC GCGGGCGGAC GCACGCTGGG CCTGTTCTCC TCCATGCGGG CGGCGAAGGC CGCCGCGGAG GTGATGCGCG ACCGGCTCGA CACCCCGGTG CTGTGCCAGG GTGAGGACAC CACCTCGGCG CTGGTGGAGC GGTTCGCCGA CGATCCGCAG ACCTCGCTGT TCGGCACGCT GTCGCTGTGG CAGGGCGTCG ACGTGCCGGG GCCGTCGCTG TCGCTGGTGC TCATCGACCG GATCCCGTTC CCGCGGCCCG ACGATCCGTT GCTGACGGCC AGGCAGCGGG CGGTCACCGC ACACGGCGGC AACGGTTTCA TGGCCGTCGC GGCCTCGCAC GCCGCACTGC TGCTCGCCCA GGGGGCCGGC CGGTTGCTGC GGCGCACCGA CGACCGCGGT GTGGTCGCGG TCCTGGACTC GCGCATGGCG ACGGCCCGCT ACAGCGGTTA CCTGCGCGCC TCGCTGCCGC CGTTCTGGGC CACCACCGAC CCGGCCCGGG TGCGCGCGGC GCTCGAACGC CTCCGCGCCG GGTCCTGA
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Protein sequence | MATGNDDAGE RVTDLLAAAV AAVGGAERPG QVEMARAVAT AFDTGRHLAV QAGTGTGKSL AYLVPAIAHA IAVDEPVVVS TATIALQRQL VDRDLPRLAD ALSGSLPRRP QFALLKGRGN YLCLNKIHNG STGIGDAPDD RPQEELFDAV AATALGRDVQ RLTKWASDTE TGDRDELRPG VPERSWRQVS VSARECIGVS RCPYGTDCFA EKAREKAADV DVVVTNHALL AIDAISDAAV LPEHSAVVID EAHELADRVT SVATGELSAT SLGIAHRRVA RLVEGELADR LEAAVATVSS AIHDGTPGRI DRLDDELATY LTALRDAADR ARSAIDTAPS DPKAAAARTE AVTALSDVSD TANRILDSFV PAIPDRVDVV WLDHEGGGAG SVSAILRVAP LSVAGLLRTR LFEHATTVLT SATLTVGGNF EAMARAWGLA DTKWHGLDVG SPFDHAKAGI LYVAAHLPPP GRDGTGSAEQ LKEIEALITA AGGRTLGLFS SMRAAKAAAE VMRDRLDTPV LCQGEDTTSA LVERFADDPQ TSLFGTLSLW QGVDVPGPSL SLVLIDRIPF PRPDDPLLTA RQRAVTAHGG NGFMAVAASH AALLLAQGAG RLLRRTDDRG VVAVLDSRMA TARYSGYLRA SLPPFWATTD PARVRAALER LRAGS
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