Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3805 |
Symbol | |
ID | 4112636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4055730 |
End bp | 4056587 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638032944 |
Product | phage major capsid protein, HK97 |
Protein accession | YP_640967 |
Protein GI | 108800770 |
COG category | [R] General function prediction only |
COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.183482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTCC TCAGCACATC TGCTGGCTCG ATCCTCAAGC CCGAAGAGGT CCACGACCTC ATCGTCCAGC CCACCCAGGA GCAGTCGGTC GCAATGCAGA CCGCCACCGT GGTGCCCACC AGCAGCGCGG AGTTCCGGTT CCCCGTCGTC GTGGAAGATG CTGCAGCACA GTGGCTTTCG GAGGGCGAAG AGATTCCCCT GACGGACCCG ACCGTCGATG AGGTGGTCGC CCGCCCCAAG AAGATCGCCT CACTGACGAA GGTGAGTCGC GAACTGGCCG AGGACAGTTC GCCCGAAGCC ACCGCGCTCG TCGGTGCGAG CGTCGCCCGC GACATGGCGA GGCGTATCGA CGCGGCCTGG TTCGCGGCCT CGACGGCGAA GGGTCCGGCC GGTCTTGCCA GCCTGATCGG AACCGCCCAG TCGGTCGCCG GTGGGGCGTA CACCAACCTC GACGCCCTCG CCGAGGCCCT CAGCCTGATC GAGGATGTCG GCGGCAACCC GACCGCGTTC GTCTCGAATT CCTCGACGGT GCTGGCACTG TCGAAGCTCA AGAAGACCAG CGACTCCAAC GAGCCGCTGC TGTCGCCGAA CCTCGCCACC GGCGCGACAC AGCGCATCGA GCGCCAACTC CTCGGTGTGC GCCTGCACTC CACGCCGGAC ACCAACCTCG AAGACGACGT GATCTGGGCC TACGACCAGT CGAAGGTCTT CGTGGTGCTG CGCCGCGACG TGGACCTGGC CGTCGACCAG TCCGCATTTT TCACGAGTGA CAGCCTGGCT GTCCGCTGCA CCATGCGGAT CGACTTCGCC TTCCCGCACC CGCAGAGCGT GGTGCGAGTC GGGCCGGACG GCAGCTAG
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Protein sequence | MAFLSTSAGS ILKPEEVHDL IVQPTQEQSV AMQTATVVPT SSAEFRFPVV VEDAAAQWLS EGEEIPLTDP TVDEVVARPK KIASLTKVSR ELAEDSSPEA TALVGASVAR DMARRIDAAW FAASTAKGPA GLASLIGTAQ SVAGGAYTNL DALAEALSLI EDVGGNPTAF VSNSSTVLAL SKLKKTSDSN EPLLSPNLAT GATQRIERQL LGVRLHSTPD TNLEDDVIWA YDQSKVFVVL RRDVDLAVDQ SAFFTSDSLA VRCTMRIDFA FPHPQSVVRV GPDGS
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