Gene Mmcs_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3627 
Symbol 
ID4112459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3872195 
End bp3873013 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID638032765 
ProductHpcH/HpaI aldolase 
Protein accessionYP_640790 
Protein GI108800593 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0858993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCTCG GCAACAACGG GCCCGGGTGG CTGTTCTGCC CGGCCGACCG GCCGGAGCGC 
TTCGAGAAGG CTGCCGCGGC AGCCGATGTG GTGATCCTCG ACCTCGAGGA CGGGGTGGCT
GCCAGGGACC GGGAGGCGGC GCGCGCGGCG CTCGTCGACA CCCCGCTCGA CCCGTCGCGC
ACCGTCGTCC GGGTGAACCC GACCACCACG CCCGACCATG CCCTCGACCT GCAGGCGCTG
GCACGGACCG ACTACACGAC CGTCATGCTC GCCAAGACCG AGAGCGCAGA ACAGGTGAGC
GCACTGGCGC CGCTGGAGGT GGTGGCGCTG ATCGAAACCC CGCTGGGGGC GCTCACCGTC
GTCGAATCGA GTCGCGTGGA CAACACCGTC GCGGTGATGT GGGGCGCCGA GGATCTGCTG
GCGGTCACCG GCGGCACGTC GAGTCGGTGG CCCGACGGCT CCTACCGGGA CTTCGCCGTG
CACGTCCGCT CCCGGTCGCT GCTGGCCGCC AAGGCCTACG GCCGGATGGC ACTGGACTCG
GTCTACCTCG ACATCAAGGA TCTCGACGGG CTGCGGGCCG AAACCGACGA TGCGGTCGCG
GTCGGATTCG ACGCCAAGGT CGCCATCCAC CCCACCCAGG TCGCGGTGAT CCGCGACGGC
TACCGGCCCA CCGACGAACA GGTCGACTGG GCCCGTCGCG TCCTGGACAC GGCGCACGAT
GAACGCGGCG TCTTCCAGTT CGAGGGCATA ATGGTGGATG CCCCAGTGCT GAGGCGAGCA
GAGCGCATCG TCGCGTTGGC GCCACACCCA GGCAGCTGA
 
Protein sequence
MTLGNNGPGW LFCPADRPER FEKAAAAADV VILDLEDGVA ARDREAARAA LVDTPLDPSR 
TVVRVNPTTT PDHALDLQAL ARTDYTTVML AKTESAEQVS ALAPLEVVAL IETPLGALTV
VESSRVDNTV AVMWGAEDLL AVTGGTSSRW PDGSYRDFAV HVRSRSLLAA KAYGRMALDS
VYLDIKDLDG LRAETDDAVA VGFDAKVAIH PTQVAVIRDG YRPTDEQVDW ARRVLDTAHD
ERGVFQFEGI MVDAPVLRRA ERIVALAPHP GS