Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3576 |
Symbol | clpX |
ID | 4112408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 3807952 |
End bp | 3809232 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638032711 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_640739 |
Protein GI | 108800542 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.434701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCA TTGGAGACGG CGGTGACCTG CTGAAGTGCT CGTTCTGCGG GAAGAGTCAG AAGCAGGTCA AGAAGCTGAT CGCGGGCCCC GGCGTATACA TCTGTGACGA GTGCATCGAT CTCTGCAACG AGATCATCGA AGAGGAACTG GCCGACGCCG ACGAGGTGAA ACTCGACGAG CTGCCCAAGC CCGCGGAGAT CCGCGAGTTC CTCGAGAACT ACGTCATCGG ACAGGACACC GCCAAGCGCA CCCTGGCCGT CGCCGTCTAC AACCATTACA AGCGCATCCA GGCCGGCGAG AAGAGCCGCG ATTCGCGCAC CGAGCCCGTC GAGTTGACCA AGTCCAACAT CCTGATGCTG GGCCCGACCG GCTGCGGTAA GACCTACCTC GCCCAGACGC TGGCCAAGAT GCTCAACGTG CCGTTCGCGA TCGCCGACGC CACGGCGCTG ACCGAAGCCG GCTACGTCGG TGAGGACGTC GAGAACATCC TGCTGAAGCT GATCCAGGCC GCCGACTACG ACGTCAAGCG CGCCGAGACC GGCATCATCT ACATCGACGA GGTCGACAAG ATCGCCCGCA AGAGCGAGAA CCCGTCGATC ACCCGCGACG TCTCCGGCGA AGGTGTGCAG CAGGCGCTGC TCAAGATCCT CGAGGGCACG CAGGCGTCGG TGCCTCCGCA GGGCGGGCGC AAGCACCCCC ACCAGGAGTT CATCCAGATC GACACCACCA ACGTGCTGTT CATCGTCGCG GGTGCGTTCG CCGGTCTGGA GAAGATCGTC TCCGACCGCG TCGGCAAGCG CGGCCTCGGC TTCGGCGCGG AGGTCCGCTC CAAGGCCGAG ATCGACACCC AGGACCACTT CGCCGAGGTC ATGCCCGAGG ACCTGATCAA GTTCGGTCTG ATCCCCGAGT TCATCGGCCG GTTGCCGGTC GTGGCGTCGG TGACCAACCT CGACAAGGAG TCGTTGGTCA AGATCCTGTC GGAGCCGAAG AACGCGTTGG TCAAGCAGTA CACGCGGCTG TTCGAGATGG ACGGCGTCGA GCTGGAGTTC ACCGGTGACG CGCTGGACGC CATCGCCGAT CAGGCCATCC ACCGCGGCAC CGGCGCCCGT GGCCTGCGCG CCATCATGGA GGAAGTCCTG CTGCCGGTGA TGTACGACAT CCCCAGCCGC GACGACGTCG CGAAGGTCGT CGTCACCAAG GAGACCGTGC AGGACAACGT GCTGCCGACG ATCGTGCCGC GTAAGCCGTC ACGCCCCGAG CGTCGCGACA AGAGCGCCTA G
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Protein sequence | MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL ADADEVKLDE LPKPAEIREF LENYVIGQDT AKRTLAVAVY NHYKRIQAGE KSRDSRTEPV ELTKSNILML GPTGCGKTYL AQTLAKMLNV PFAIADATAL TEAGYVGEDV ENILLKLIQA ADYDVKRAET GIIYIDEVDK IARKSENPSI TRDVSGEGVQ QALLKILEGT QASVPPQGGR KHPHQEFIQI DTTNVLFIVA GAFAGLEKIV SDRVGKRGLG FGAEVRSKAE IDTQDHFAEV MPEDLIKFGL IPEFIGRLPV VASVTNLDKE SLVKILSEPK NALVKQYTRL FEMDGVELEF TGDALDAIAD QAIHRGTGAR GLRAIMEEVL LPVMYDIPSR DDVAKVVVTK ETVQDNVLPT IVPRKPSRPE RRDKSA
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