| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3514 |
|---|
| Symbol | |
|---|
| ID | 4112346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 3740139 |
|---|
| End bp | 3741719 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638032649 |
|---|
| Product | prohead peptidase |
|---|
| Protein accession | YP_640677 |
|---|
| Protein GI | 108800480 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3740] Phage head maturation protease |
|---|
| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGC GGGCAGTCGA GTTGACCGAG GTCCGCACCG ACGACGACGC CGGGACTTTT
ACCGGTCTCG CCGCCGGGTA CGACAACGTC GACACGCACG GCACCGTTCT ACAGCGCGGC
GCGTTCGCAT CCTCGCTCGC CGGTGGCGGC GTCGTTCCGT TGTTCTGGGA ACACGGCCAC
GACGATCCGC GGGCCATCGT CGGCGAGGTG ACCGCGGCCG TTGAGACCAC CCGCGGGCTG
GAAATCGTCG GCAAGCTCGA CACCGACACC GAACGCGGCG CCGCCGCTTA CCGGGCGGTC
AAAGGCCGAC GTATCCGCGG TCTGTCGGTC GGGATGCGCC CGACGCAGCG GCGCGGGGCG
AGCATCATCG CCGCCGACCT CTGCGAAATC TCGCTGGTCA TGCGCCCCAG CAACAGCCGC
GCGCTCGTTG AGTCGGTCCG GTCGGCCGAC GACGCGCTTC AAACCCGGGC GGCCAGCGCG
GTCGCCACTT TCGAGACCAT CGCAAAGGAC ACCACCATGA CCGAGCCCAT CACCACCGAA
CGCCGCGACG AGCTCGTGGC CGAGACCCGC GGGCTCGTGG CCGCGGCTCA GGGCCGCACG
CTGACCGCCG AGGAAGTCGC CACCATCGAG ACCAACACCG AGACGATCCG CCGCCACGAC
GAGCAGGCGT TGGAGACGCG CAACGACGCG CAGGCGGCCA ACATCGCCCG CGCGCTCGGT
CAGGCCATCG ACACCCGTTC GGGCGGTCGG CAGTCGCCGT TCATGCTCAG CGCCGACAAC
GTCACCACGC TCGAGACCGC GCGCAAGCGC TTCGAGAACA TCACCGTTCT CGAGACCCGC
GCGGCGCTGG CGACCACCGA CATGGGCACC GCTCGCGAGT ACGGCCCGAA CGGCCTGCAG
GCGCCGCGGT CGCTGTGGCG TTCGGCCGGC ATCCCGACGA CCGCACCGGA CGGGTACAGC
GGCGTCGTTC CGCAGTTCAC GCTGCCCGGT GGCGCGGTGC TCGTCGGTGA GGGCGTCGAC
CACCAGGAGT TCGACGGCGT CAACCCCGAC GCGGTGACGA TCGGCCGTGC CGGTGCGTGG
TCGACACTGA CCTCCGAAGC GCTGCTATCC ACGAGCATCA CCGAGGTTTC GGCCGCGCAC
GCGCGCATCA TCGCCCGCAA CGTTGACCGT GCGACGGTGG CGAAGATCGA GGACGCCAGC
CCGGACACGA TGAGCATTGA TCAGGCGTTG GTGACGGTGG CTGCCGAATG CGCCTGCGAT
GTCAGCGACT TGTGGATTGT CGGTGCGCCG GCCGCGGTGG CGGCGCTCGT CGGCAATGCG
ACCTTCACGC CCGCCAACGG CGGCGACGCA GAGTCCTACG CATCCCGCTA CGGCGGTGCG
GCGGTGTACC CGACGACCTC GGCGACCGCG GACACGCTGA CGGTGTTCCA TCCGCAGAGC
TTCCGCGCGT TCGCGTCGCC ATTGTCGTCG GGCGTGTTCG TGGATCCGAA GTCGGGCAAG
CAGGACTTCG GTCAGTGGAT GTTCTACGGG CTCGGACAGG CGCTCGTGGG CGCCGCGATC
ACCGTGGACA CCACCCCATA G
|
|---|
| Protein sequence | MHTRAVELTE VRTDDDAGTF TGLAAGYDNV DTHGTVLQRG AFASSLAGGG VVPLFWEHGH
DDPRAIVGEV TAAVETTRGL EIVGKLDTDT ERGAAAYRAV KGRRIRGLSV GMRPTQRRGA
SIIAADLCEI SLVMRPSNSR ALVESVRSAD DALQTRAASA VATFETIAKD TTMTEPITTE
RRDELVAETR GLVAAAQGRT LTAEEVATIE TNTETIRRHD EQALETRNDA QAANIARALG
QAIDTRSGGR QSPFMLSADN VTTLETARKR FENITVLETR AALATTDMGT AREYGPNGLQ
APRSLWRSAG IPTTAPDGYS GVVPQFTLPG GAVLVGEGVD HQEFDGVNPD AVTIGRAGAW
STLTSEALLS TSITEVSAAH ARIIARNVDR ATVAKIEDAS PDTMSIDQAL VTVAAECACD
VSDLWIVGAP AAVAALVGNA TFTPANGGDA ESYASRYGGA AVYPTTSATA DTLTVFHPQS
FRAFASPLSS GVFVDPKSGK QDFGQWMFYG LGQALVGAAI TVDTTP
|
|---|
| |