Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3186 |
Symbol | |
ID | 4112018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 3377262 |
End bp | 3378893 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638032318 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_640349 |
Protein GI | 108800152 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.894285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGCA CAATGCAAAA TGTTCCGCTC ACGGTGTCGG CGATCGTCCA GCATGCGGCA GCCATACACG GTGACAGCGA GGTCGTCACT CCGACCGGAA ATGGATATCG GAGAACGCCT TACCGCATTG TGCTGGCGCG AGTGGCTCGC CTTGCCAATG CGCTGCGCAG TCTTGGCGTC ACGGCAGACC AACGCGTGGC CACCTTCCAG TGGAGCAACC AGGAACATCT GGAGGCCTAC TGTGCGATTC CCTCCATGGG CGCGGTCCTG CACACGCTCA ACATTCGTTT GGCCCCAGAG CAACTGGCGT ACATCGCCAA TCACGCGAGC GATCAGATCG TCCTAGTCGA CGCTTCGGTT GCCCCGTTGT TGGCGCGCGC GCTCCCAGCG ATGGCGTCGG TGCACACCGT CATCGTCACC GGAGAGGGCG ACCTTGCCCC GCTCCAGGGA TGCGGGAAGA CCGTTCTGCG TTACGAGGAA GTGCTTGCCG GCCAAGAAGA ATCATTTGAC TGGCCTGAGC TCGACGAGCT GTCCGCCGCG GCCATGTGTT ATACGAGCGG TACCACCGGA GATCCCAAAG GCGTCGTCTA CAGCCACCGT TCGACGTACC TTCACTCCCT GACCGCCTGC ACAGCTAACG CTTTGTCAGT CAGCGAGGCC GACCGTGTGC TGGCCATCGT CCCAATGTTT CACGCCAATG CGTGGGGGCT TATTTACGCA GCGTTGATGT CCGGTGCGGA TCTGGTACTG CCTGACCGGT ATCTCCAAGC CGAACCGTTG GTGTCGATCA TCGAAGACAC CAGACCGACC TTGGCCGGTG CAGTGCCGAC GATCTGGAAC GATGTCGACC GATATCTGGA TTCGCACCCT GAGCGGGACA TTTCTTCGTT ACGGCTGGTC GCGTGCGGGG GGTCTGCTGT TCCGCTTTCG TTGATGCGGG CATTCGAAGA GAAGTACGAC GTGCCCATTG TGCAGGCCTG GGGTATGACC GAAACCTCTC CGTTGGCGAC CGTTGCACGT CCGGCTCACA GAGCCGACGC GACGCGGCGC TGGGAGCTGC GCGCATCCCA GGGCCGACCG ATCTGCGGTG TCGAAATCCG GTTGCGGGAC GACGACGGGA AAGACGTGCC GTGGGACGGG CAATCAGTTG GGGAGATCCA GGCGCGCGGT CCCTGGATCA CCGGGTCCTA TTTCGGAAAC AACGATACGG AGAAGTTCGA CGAAGGATGG CTGCGTACCG GTGATGTGGG CAAGATCGAC GCCGAGGGCT ATCTGACACT GACCGACCGC TCGAAAGACG TCATCAAGTC AGGTGGCGAA TGGATCTCCT CGGTGGAGCT GGAAAACACG CTGATCGGCC ACCCTGCCGT GTACGAAGCG GCGGTAGTCG GCGTCGCGGA CGATAAATGG CAGGAAAGGC CGTTGGCGCT TGTCGTCGTC CACCCCGGAA CCGACGTTGA CATTGACCAA CTCCGATCGT TCCTTGCGGA CAAAGTCGCC AAATGGTGGA TTCCCGAGCG ATGGAGCTTC GTGTCCGATA TTCCGAGGAC GAGCGTCGGA AAGTACGACA AAAAGGTCAT CCGTGCGCGC CACTCTGCCG GCGAATACCT CATCGAAATC GAAACGTCAT AA
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Protein sequence | MQSTMQNVPL TVSAIVQHAA AIHGDSEVVT PTGNGYRRTP YRIVLARVAR LANALRSLGV TADQRVATFQ WSNQEHLEAY CAIPSMGAVL HTLNIRLAPE QLAYIANHAS DQIVLVDASV APLLARALPA MASVHTVIVT GEGDLAPLQG CGKTVLRYEE VLAGQEESFD WPELDELSAA AMCYTSGTTG DPKGVVYSHR STYLHSLTAC TANALSVSEA DRVLAIVPMF HANAWGLIYA ALMSGADLVL PDRYLQAEPL VSIIEDTRPT LAGAVPTIWN DVDRYLDSHP ERDISSLRLV ACGGSAVPLS LMRAFEEKYD VPIVQAWGMT ETSPLATVAR PAHRADATRR WELRASQGRP ICGVEIRLRD DDGKDVPWDG QSVGEIQARG PWITGSYFGN NDTEKFDEGW LRTGDVGKID AEGYLTLTDR SKDVIKSGGE WISSVELENT LIGHPAVYEA AVVGVADDKW QERPLALVVV HPGTDVDIDQ LRSFLADKVA KWWIPERWSF VSDIPRTSVG KYDKKVIRAR HSAGEYLIEI ETS
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