Gene Mmcs_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3152 
Symbol 
ID4111984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3344995 
End bp3345879 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID638032282 
Productshort chain dehydrogenase 
Protein accessionYP_640315 
Protein GI108800118 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0242299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGACGCA TGACTTCCGT ACACGGCAAG GTCGTGTTGA TCACCGGTGG GGCCCGAGGG 
GTCGGCGAAG AACTGGCCCG CCGGTTACAT GCCAAGGGCG CCAAGCTGGT GCTCACCGAC
CTGGATGACG GTCCGCTCTC GGCGCTGGCC GCAGACCTCG GCGCCGAGCG GGTGTTGACG
GTGGTCGCCG ACGTGTGCGA CCTCGAGACC ATGCAGTCCG CTGCCGAACA GGCCGTGAGC
CGGTTCGGCG GGATCGACAT CGTCATCGCG AACGCGGGGA TCGCCAGCTA CGGATCGGTG
CTGGTGGTCG ATCCCGACGC CTTCCGGCGG GTGCTCGACG TCAACGTGGT CGGCGTGTTC
AACACCGTGC GCGCCGCGCT CCCGTCGGTC ATCGAGCGCA AGGGCTACAT CCTGGTGGTG
TCGTCGCTGG CGGCGTTCGC CGCCGCGCCG GGGATGGCGC CCTACGACGC GTCGAAGGCC
GGTGTGGAGC ACTTCGCCAA CGCCCTGCGC CTCGAGGTCG CCCACCACGG CGTGACGGTC
GGGTGCGCGC ACATGTCGTG GATCGACACC CCGCTCGTGC AGGACACCAA GGCCGATCTG
CCGAGTTTCC GCACCATGCT CGACTCACTG CCCGGCCCGC TCAGCAAGAC CACCTCGGTG
CAGAAGTGTG GCGAGGTGTT CGTCAAGGGC ATCGAACGCC GTAGGGAACG CATCTACTGC
CCGGGTTGGG TCGGCCTGAT CCGCTGGGCC AAACCGATAC TCACCACGCG GATCGGTCAG
GCCTCGGTGC TCAAGACGGC GCCGAAGGTG TTGCCCCAGA TGGACGCCGA GGTGACCGCA
CTGAAGCGCT CGCTGGGCGC CCGCACCCAC GGGCTGAAGA AATGA
 
Protein sequence
MRRMTSVHGK VVLITGGARG VGEELARRLH AKGAKLVLTD LDDGPLSALA ADLGAERVLT 
VVADVCDLET MQSAAEQAVS RFGGIDIVIA NAGIASYGSV LVVDPDAFRR VLDVNVVGVF
NTVRAALPSV IERKGYILVV SSLAAFAAAP GMAPYDASKA GVEHFANALR LEVAHHGVTV
GCAHMSWIDT PLVQDTKADL PSFRTMLDSL PGPLSKTTSV QKCGEVFVKG IERRRERIYC
PGWVGLIRWA KPILTTRIGQ ASVLKTAPKV LPQMDAEVTA LKRSLGARTH GLKK