| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2689 |
|---|
| Symbol | |
|---|
| ID | 4111521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2841614 |
|---|
| End bp | 2843197 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638031813 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_639852 |
|---|
| Protein GI | 108799655 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.151228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCCC CCGCCCGCCG GCGGGGAGGC CAGTTGACGG TGCAGGGCTG GTTGAACGTC
GTGCTGGCCG TGATGGGAAT CCTGGTGCTG GCCGGCGCGT TCGCCGGAGC GATCCTGATG
AACCGCACGG ACGCGGTGTC GCGCGAACTG ATCGAAGAGA TCCAACCGTC TCGGGTGGCG
GCCTACCGGT TGCAGGCCGC CCTGCGCGAT CAGGAGACGG CGGTACGGGG TTACGCGATC
GCCGCCGACG AACAGTTCCT CGAGCCGTAC TACGAGGGGC AGCAGACCGA ACGGGAAGCG
GCCGAGGAGA TCCGCGAACA CGTCGGTGAC CACGCCAACC TGATCGCCGA TCTGGATGCG
GTCGAACAGG CCACCGCCGA GTGGCGCGCG AACTACGCCG AGCCGTTCAT CCGGAGCGTG
GGCCCGGGCG CCCCCGTCGA CAACGACCTG GTGCAACGCG GTAAGGAGCG CTTCGACAAC
ATCCGCGCGC TGTTCCACGT GCAGAACGTC GACCTCGCGG CGGCGCGCAC CGCCGGGGTC
AAGGAACTGG ACGAGGTGCG CGGATGGCGC GACCGCGTCC TCGCCGGCAT CATCGTCACG
TTCTTCGTGA CCGCCTTGGC GCTGGCGATC CTGGCTCGCA GCGCGCTGGT GCGCCCGCTG
TCGGCACTGG CCGCGTCGTG CCGCCGCATC ACCGAGGGGC ATTTCGACGA GCGGATCGTG
GCCCAAGGGC CGCGTGACGT GCGGAGCATG GCGTCGGACG TCGAGGACAT GCGACAACGG
ATCGTGGAGG AACTCGAGGC GTCGCGGGCG GCCCGTGAGC AACTCGACGA ACAGGCCGTC
GAGTTGCGCC GGTCGAACGC CGAGCTGGAG CAGTTCGCCT ATGTCGCCTC GCATGACCTG
CAGGAACCGC TGCGCAAGGT GGCCTCGTTC TGTCAGCTGC TCGAGAAGCG CTACGGCGAC
AAACTCGACG AGCGCGGCGT CGAGTACATC AAGTACGCCG TCGACGGTGC CAAACGGATG
CAGGTGCTCA TCAACGACCT GCTGACCTTC TCGCGCGTCG GACGCCTCAG TGCCGCACAC
ACCGACGTCG AACTCGACGA GGCGCTCGAC GCCGCGGTGT CGAATCTCGA AACCTCCATC
GAGGAGTCCG GCGCCGAGAT CGTGCGCCCC GAAGAGCCGT TACCCCAGGT CCTGGGTGAT
CCGACGCTGC TGACGATGCT GTGGCAGAAC CTGATCGGCA ACGCGGTGAA GTTCCGGAAA
CCGGACACCA CGCCCCGGAT CGTGATCGAA TGCCAGCGCG GCACCGACGA CCGGGACGGC
CAGTGGGTGT TCACCGTGTC GGACAACGGC ATCGGCATCG CCGAGGAGTT CTCCCAGAAG
GTGTTCGTCA TCTTCCAGCG GCTGCACGGG CGCGAGGCCT ACAGCGGCAC CGGCATCGGG
CTGGCGCTGT GCAAGAAGAT CGTCGAGTAC CACGGCGGCT CCATCTGGAT CGACAACACC
TACACCGAAG GCACCCGGTT CCGCATGACC CTTCCGGTCG CCGTCCACGA ACAACCCGAA
GTGGTTCTGG AAGGAGCCCA ATGA
|
|---|
| Protein sequence | MTAPARRRGG QLTVQGWLNV VLAVMGILVL AGAFAGAILM NRTDAVSREL IEEIQPSRVA
AYRLQAALRD QETAVRGYAI AADEQFLEPY YEGQQTEREA AEEIREHVGD HANLIADLDA
VEQATAEWRA NYAEPFIRSV GPGAPVDNDL VQRGKERFDN IRALFHVQNV DLAAARTAGV
KELDEVRGWR DRVLAGIIVT FFVTALALAI LARSALVRPL SALAASCRRI TEGHFDERIV
AQGPRDVRSM ASDVEDMRQR IVEELEASRA AREQLDEQAV ELRRSNAELE QFAYVASHDL
QEPLRKVASF CQLLEKRYGD KLDERGVEYI KYAVDGAKRM QVLINDLLTF SRVGRLSAAH
TDVELDEALD AAVSNLETSI EESGAEIVRP EEPLPQVLGD PTLLTMLWQN LIGNAVKFRK
PDTTPRIVIE CQRGTDDRDG QWVFTVSDNG IGIAEEFSQK VFVIFQRLHG REAYSGTGIG
LALCKKIVEY HGGSIWIDNT YTEGTRFRMT LPVAVHEQPE VVLEGAQ
|
|---|
| |