| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2325 |
|---|
| Symbol | |
|---|
| ID | 4111158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2475012 |
|---|
| End bp | 2476349 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638031450 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_639489 |
|---|
| Protein GI | 108799292 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.90539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGACT CGCTGTTCGA TCTGCCGGCT GACGGCCCCG TCGCGGCGGC CGGTGCACCG
GTGTCGGCGC CCCTGGCGGT GCGGATGCGT CCGGCGAGCC TCGATGAGGT GGTCGGTCAG
CAGCACCTGC TGAAACCGAA CTCGCCGCTG CGCCGCCTCG TCGAGGGATC CGGCGCCGCC
TCGGTGATCC TCTACGGTCC GCCCGGCACC GGCAAGACCA CGCTGGCATC CCTCATCTCG
CATGCGACCG GCCGCCGGTT CGAGGCGCTG TCGGCGCTGT CGGCGGGCGT CAAAGAGGTG
CGCGCCGTCA TCGAGACCGC TCGCCAGGGC ATCCTGCGGG GGCAGCAGAC CGTCCTGTTC
ATCGACGAGG TCCACCGGTT CTCCAAGACC CAGCAGGATG CGTTGCTGGC CGCGGTGGAG
AACCGGATCG TCCTGCTGGT CGCGGCGACC ACCGAGAACC CGTCGTTCTC GGTGGTGGCG
CCGTTGCTGT CGCGGTCGCT GATCCTGCAG CTGCAGCCAC TGGCCCCCGA CAGCATTACC
GAGGTGGTCC GCCGCGCGGT CGCCGATCCG CGCGGGCTCG CCGACAGCGT CGACGTCAGC
GACGACGCCG TCGACCTGAT CGTCCAGTTG TCGGCCGGTG ACGCCCGCCG GGCGCTGACG
GCGCTCGAGG TCGCCGCCGA ATCGGCCGCG GCGGCCGACG GCCGCGTGAC GGTCGACATC
GTCGAACAGT CGTTGGACAA GGCCGCGGTG CGCTACGACC GCGACGGCGA CCAGCACTAC
GACGTCGTCA GCGCCTTCAT CAAATCGGTC CGCGGTTCCG ACGTGGACGC CGCGCTGCAC
TATCTCGCTC GGATGCTGGT GGCGGGGGAG GACCCCCGAT TCATCGCGCG CAGGCTGATG
ATCCTCGCCA GCGAGGACAT CGGCATGGCC GATCCGACGG CGCTGCCCCT CGCGGTCGCG
GCGGCGCAGA CGGTCCAGCT GATCGGGATG CCCGAGGCGC AACTGACCCT GGCCCACGCG
ACCGTGCATC TGGCCACCGC CGCGAAGTCC AACGCCGTCA CGACCGCGCT CGGGGCCGCG
ATGAGCGATG TCCGCAACGG CAAGGCCGGC CAGGTCCCCG CCCACCTGCG CGACGGCCAC
TACTCCGGTG CGGCCAAGCT CGGTAACGCC GTCGGGTACG TCTACGCCCA CGATCACCCG
GACGGGGTTG TGCCGCAACA GTATCCACCC GACGAACTGG TTGGCGTGGA CTACTACCGG
CCCACCGGCC GCGGCGCCGA ACGGGAGATC GGCGGTCGCC TCGACCGGTT GCGCGCCATC
ATCCGCAAGC GGCGCTGA
|
|---|
| Protein sequence | MSDSLFDLPA DGPVAAAGAP VSAPLAVRMR PASLDEVVGQ QHLLKPNSPL RRLVEGSGAA
SVILYGPPGT GKTTLASLIS HATGRRFEAL SALSAGVKEV RAVIETARQG ILRGQQTVLF
IDEVHRFSKT QQDALLAAVE NRIVLLVAAT TENPSFSVVA PLLSRSLILQ LQPLAPDSIT
EVVRRAVADP RGLADSVDVS DDAVDLIVQL SAGDARRALT ALEVAAESAA AADGRVTVDI
VEQSLDKAAV RYDRDGDQHY DVVSAFIKSV RGSDVDAALH YLARMLVAGE DPRFIARRLM
ILASEDIGMA DPTALPLAVA AAQTVQLIGM PEAQLTLAHA TVHLATAAKS NAVTTALGAA
MSDVRNGKAG QVPAHLRDGH YSGAAKLGNA VGYVYAHDHP DGVVPQQYPP DELVGVDYYR
PTGRGAEREI GGRLDRLRAI IRKRR
|
|---|
| |