Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2291 |
Symbol | |
ID | 4111124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2431217 |
End bp | 2432482 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638031416 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_639455 |
Protein GI | 108799258 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.553297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGAC CAGGACGCTC CTCGTTCCAC AGATCGGCTC TTGCTGCGGG AAGTCTGGTC GCCGTGACCA GCATGTTGCT GGCGGGCTGC GGCAGCAAGG CCAGCGACAC CGACGCCGCC AGCGCCGAGT CCTGTGTCGA CACCTCCGGC CCGAACATCA AGGTGGGCTC GCTGAACTCG CTGTCCGGCA CGATGGCGAT CTCGGAGGTC ACCGTCCGCG ACGCCATCAA GCTGGCGGTC GACGAGATCA ACGGCGCCGG CGGTGTCCTG GGCAAGCAGA TCCAGCTGGT CGGCGAGGAC GGGGCGTCGG AGCCCACGGT CTTCGCCGAG AAGGCGGAGA AGCTCATCAG CAGCGACTGC GTCGCCGCGG TCTTCGGTGG ATGGACCTCG TCGAGCCGCA AGGCCATGCT GCCGGTCTTC GAGAGCGCGA ACTCGCTGCT CTACTACCCC GTCCAGTACG AGGGCCTGGA GTCCTCCCCC AACATCTTCT ACACCGGCGC CACCACCAAC CAGCAGATCG TGCCCGCCCT CGACTACCTC AAGGAGAAGG GCGTCAAGTC CCTCTACCTG GTCGGCAGCG ACTACGTCTT CCCGCAGACC GCCAACCGCA TCATCAAGGC CTACGCCGAG GCCAACGGCA TCGAGATCAA GGGTGAGGAC TACACCCCGC TGGGTTCGAC CGACTTCTCC ACGATCATCA ACAAGGTGCG TTCGGCCGAT GCCGATGCGG TGTTCAACAC CCTCAACGGC GACTCCAACG TCGCGTTCTT CCGCGAGTAC CGCAACGTCG GCCTGACCCC GCAGGACATG CCGGTGGTCT CGGTCTCCAT CGCCGAGGAG GAGGTCGGCG GTATCGGTGT CCAGAACATC GACGGCCAGC TGACCGCGTG GGACTACTAC CAGACCATCG ACACCCCGGT GAACAACGAG TTCGTCAAGG CCTACAAGGC CAAGTTCGGC GCCGACAAGC CGACCTCGGA CCCGATGGAA GCCGCCTACG TGTCGGTGTA CCTGTGGAAG AACACCGTCG AGAAGGCACA GTCGTTCGAC GTCAAGGCGA TCCAGGACAA CGCGGGCGGG GTCACGTTCG ACGCACCCGA GGGCAAGGTC ACGATCGACG GCGAGAACCA CCACATCACC AAGACCGCCC GCATCGGTGA GATCCGCCCG GACGGCCTGA TCTACACGAT CTGGGAATCC CCCGGGCCGA TCGAGCCGGA CCCGTACCTG AAGTCCTACC CGTGGGCCGC CGGCCTCTCC AGCTGA
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Protein sequence | MRRPGRSSFH RSALAAGSLV AVTSMLLAGC GSKASDTDAA SAESCVDTSG PNIKVGSLNS LSGTMAISEV TVRDAIKLAV DEINGAGGVL GKQIQLVGED GASEPTVFAE KAEKLISSDC VAAVFGGWTS SSRKAMLPVF ESANSLLYYP VQYEGLESSP NIFYTGATTN QQIVPALDYL KEKGVKSLYL VGSDYVFPQT ANRIIKAYAE ANGIEIKGED YTPLGSTDFS TIINKVRSAD ADAVFNTLNG DSNVAFFREY RNVGLTPQDM PVVSVSIAEE EVGGIGVQNI DGQLTAWDYY QTIDTPVNNE FVKAYKAKFG ADKPTSDPME AAYVSVYLWK NTVEKAQSFD VKAIQDNAGG VTFDAPEGKV TIDGENHHIT KTARIGEIRP DGLIYTIWES PGPIEPDPYL KSYPWAAGLS S
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