| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2136 |
|---|
| Symbol | |
|---|
| ID | 4110969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2279583 |
|---|
| End bp | 2281820 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638031257 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_639300 |
|---|
| Protein GI | 108799103 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCAGG GGGTCGGCTT CCGGCCCTTC GTGTACACCA CCGCGACGGC GCTCGGACTG
ACCGGGTCGG TGCGCAACGA CAGCGCGGGC GCGGTCGTCG AGATCGAGGG CGACCCGGAC
GCGCTGACCC GCTTCGTCGA GCGGTTGCAC ACCCGGCCGC CACCGCTCGC GGTCATCGAA
TCCGTTGACA TCGAAGACCT TCCGCCCGTC GGCGGCACCG GGTTCTTCAT CGCCGACACC
TCTCGCGGCC GCGGCCGCAC GCTGGCCTCA CCGGATGTCG CGATGTGCGC GCAGTGCGCC
GCCGAACAGC GCGACCCCGG CGACCGGCGC TACCGGCACC CGTTCGTCAA CTGCACCGAC
TGCGGACCCC GGTTCACCAT CATCGCGTCG CTGCCCTACG ACCGGGCCGC CACGTCGATG
GCCGGTTTCG CGATGTGCGC GGACTGCGCC CGCGAGTACG CCGACCCCAC CGACCGCCGC
TTCCACGCGC AACCCGTGTG CTGCCCGCAC TGCGGCCCGA CCCTGACCTT CCGCGACGCC
GACGGACGCC ACACTGCGGG CGAGGACGGT CTGCGCCGGG CGCGGCGGCT GCTCCGCGAC
GGGGGTGTCG TCGCGGTGAA GGGCATCGGC GGCTACCACC TGGCCTGCGA TGCCGAGAAC
AACACCGCCG TGGCCGAACT ACGCCGCCGG AAACAGCGCG GCGACAAGCC CTTCGCGGTC
ATGGTGCCCG ATGCGGCCGC GGCCGGCCGG ATCGCCGTGC TCGACGAGGT GGCACAGCAC
CTGCTGGGCG GGCCGCAGCG GCCGATCGTG CTGGCGCCGC GACGGACACC GACCACGGTG
GCGGCCGCGG TGGCGCCCGG GAACCCGGAC CTGGGCGTGC TGCTGGCCTA TTCGCCGCTG
CACACGCTGC TGTTCGGGCT GCCCGGTGAC GAACCGGGCC CCCAGGTGCT GGTGATGACG
TCGGGGAACC TCGCGGGCGA ACCCCTCTGC TACGACGACG ACGACGCCGT CACCCGGCTT
CGCGCACTGG CCGACGGCTG GCTGATGCAC GACCGCGAGA TCCTGGTGCC CTGTGACGAT
TCGGTGGTCC GGGTGGTCGA CGGCGTCGAA CTGCCGATCC GGCGCTCCCG GGGGTACGCC
CCGTTGCCGG TGGCCCTGCC CCTCGCGGTA CCGCCGACAC TCGCGGTCGG TGCGGACCTG
AAGAACACCA TGGCTGTCGC CGACGGCCGA TACGCCTGGC TGAGCCAGCA CATCGGCGAC
ATGGACGACA TCGCGACACT GTCGGCGTTC ACCGCCGCGG AACGGCATCT GCGCGAACTC
ACCGGCGTGG CCCCGCAGAT CCTCGCGACC GACGCCCACC CGCGGTACCG CTCGACCGGA
TGGGCCCAGC GACACGCCGG TGACCGGCCG GTGCGGGCGG TACAGCACCA CCACGCCCAC
ATCGCCGCGG TGATGGCCGA GCACGGGCTC GACGGTTCGG CGCCCGTACT CGGATTCGCC
TTCGACGGAA CCGGATACGG GCCCGACGGC GCGGTGTGGG GCGGGGAGGT CCTGCTCGCC
GACTACAAGG GCTTCCGCAG GATCGCGGCG CTGGAGTACG TGCCACTGGC CGGCGGCGAT
GTCAGCGTCC TGCGGCCGTA CCGGATGGCG CTCGCACATC TGTGGGCCGC CGGGTTGCCG
TGGGCCGGCG ACCTGCCGCC GGTGCAGGCG TGTCCGGAAG ACGAGCGGCG GGTGCTGCGC
CACCAACTGG AGACCGGCCT GAACTGTGTG CCCACCTCCA GCATGGGGCG GTTGTTCGAC
TGCGTCGCCG CGCTCGCGGG GGTCCGGCAG ACCGTCGCCT ACGAGGCGCA GGCGGCGATC
GAGCTCGAGG CGCTGGCGCG CACCGTCGAC GACGATCCCG CGCCCTACGC CTTCACCGTC
ACCGAGTCCT CGGGGACGGC GATGATCGGC GCCGCCGCGG TGGTCGAGGC GATCGTCGCC
GACCGCAGGC GCGGCACGGC GGCCGCGGTG ATCGGATGGC GATTCCACCA TGCGGTGGCC
GACCTCGTCG TACGGTTGGC CGAGGGAGCC CGCGACCCCG TGGCGCTGTC GGGCGGGGTG
TTCCAAAACG CCCTGCTCCT GCGCATGACG TTGCGCGCGT TGACCGAACG CGGTGTCGAG
GTGCTGACCC ACCGCCGGGT GCCGCCGAAC GACGGCGGCA TCGCACTGGG TCAGTTGATG
GTGGCCAACG CAGGGTGA
|
|---|
| Protein sequence | MVQGVGFRPF VYTTATALGL TGSVRNDSAG AVVEIEGDPD ALTRFVERLH TRPPPLAVIE
SVDIEDLPPV GGTGFFIADT SRGRGRTLAS PDVAMCAQCA AEQRDPGDRR YRHPFVNCTD
CGPRFTIIAS LPYDRAATSM AGFAMCADCA REYADPTDRR FHAQPVCCPH CGPTLTFRDA
DGRHTAGEDG LRRARRLLRD GGVVAVKGIG GYHLACDAEN NTAVAELRRR KQRGDKPFAV
MVPDAAAAGR IAVLDEVAQH LLGGPQRPIV LAPRRTPTTV AAAVAPGNPD LGVLLAYSPL
HTLLFGLPGD EPGPQVLVMT SGNLAGEPLC YDDDDAVTRL RALADGWLMH DREILVPCDD
SVVRVVDGVE LPIRRSRGYA PLPVALPLAV PPTLAVGADL KNTMAVADGR YAWLSQHIGD
MDDIATLSAF TAAERHLREL TGVAPQILAT DAHPRYRSTG WAQRHAGDRP VRAVQHHHAH
IAAVMAEHGL DGSAPVLGFA FDGTGYGPDG AVWGGEVLLA DYKGFRRIAA LEYVPLAGGD
VSVLRPYRMA LAHLWAAGLP WAGDLPPVQA CPEDERRVLR HQLETGLNCV PTSSMGRLFD
CVAALAGVRQ TVAYEAQAAI ELEALARTVD DDPAPYAFTV TESSGTAMIG AAAVVEAIVA
DRRRGTAAAV IGWRFHHAVA DLVVRLAEGA RDPVALSGGV FQNALLLRMT LRALTERGVE
VLTHRRVPPN DGGIALGQLM VANAG
|
|---|
| |