| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1898 |
|---|
| Symbol | |
|---|
| ID | 4110732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2042072 |
|---|
| End bp | 2043247 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638031018 |
|---|
| Product | luciferase-like protein |
|---|
| Protein accession | YP_639063 |
|---|
| Protein GI | 108798866 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.749721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCGC GCCCCTATGC TGAGCGAGTG CCCAGCGATT CGTCGGCGCC GACGGTTCAG
CCCGCCGCTT TCCTGCGCAC GACCCTGCCG CTGGACCTGA CCGGGCTGGC GGCCCTCGAC
AGCGGCCGCT ACCACTCGAT CTGGCTCCCC GACCACATGG TCAGTTTCTG GCCGGACTCG
ATCTGGACAC CGGAGTTCAC CGACCTCGCC GACACCTCCC CCTCACCGCA CCGCCACCTC
GACGGGATGG CGGTGGCCGC CGCCGCTGCC GTATTGACCG AGTCCACCCC ACTGGCGACC
GCGGTCGTCG ACACCGTCCG GCGCCACCCC GCCTCACTGG CCCAGAGCGC GCTGACCATC
GACCACCTGT CCGGCGGCCG CTTCATCCTG GGACTCGGCA GCGGCGAGGC CGAGAACATC
GTCCCGTACG GATTCGACTT CGACCGGCCC GTGAGCCGGT TCGAGGAGGC GCTGCACGTC
ATCCGGTTGT TGTGGGACTC CGACGGACCC GTCGACTTCA CCGGACGGTT CCACCGACTG
CGAGGGGCGC GCCTGGACAC CGAACCGTTC GGCGGCCGCG TCCCGCCGAT CTGGATCGGA
GCCAGCGGAC CGCGGATGCT CGACCTCGTC GGTCGCCACG CCGACGGATG GTGGCCGGCC
GGGGCGTGGA CGCCGCAGCA CTACGCCGAC ATGCTCGGCG CGGTCCGGAG CTCGGCCGAA
CGGGCCGGGC GCGATCCGAT GGCGATCACC CCGTGCTTCA TCCAGGTGTG CCTGATCGCG
AAAGACGATG CCGCCCTGGC TGAGATCCTG GACGCACCGC TGGTCAAGGC GTTCCTGCTG
CAGGTGTCCG CGCAGACCCT GCGCGCGTTC GGTCACGAGC ATCCGATGGG CGACGACTGG
CGGGGGTTCC ACGACATCGA CCCGGCGACG CTGACCCGCG AACGCATCGT CGACTTCCTC
GCCCGGGTGC GGCCCGAGGC GATCCTCGCC GTCCTGCCGC ACGGCACACC CGCTCAGGTC
GCCCGCACCG TCAAGGACTA CGTCGAGGCC GGGCTGCGGG TGCCCAAGAT CATGGACTAC
GGCGCCATGG CCGGACTGCG GTTCGCGGCC GCATCCGCCG ACAACGTGCG CGAGGCCGAG
GACGAACTGA TGAGACTGTG CGGGGTACCG ATATGA
|
|---|
| Protein sequence | MPARPYAERV PSDSSAPTVQ PAAFLRTTLP LDLTGLAALD SGRYHSIWLP DHMVSFWPDS
IWTPEFTDLA DTSPSPHRHL DGMAVAAAAA VLTESTPLAT AVVDTVRRHP ASLAQSALTI
DHLSGGRFIL GLGSGEAENI VPYGFDFDRP VSRFEEALHV IRLLWDSDGP VDFTGRFHRL
RGARLDTEPF GGRVPPIWIG ASGPRMLDLV GRHADGWWPA GAWTPQHYAD MLGAVRSSAE
RAGRDPMAIT PCFIQVCLIA KDDAALAEIL DAPLVKAFLL QVSAQTLRAF GHEHPMGDDW
RGFHDIDPAT LTRERIVDFL ARVRPEAILA VLPHGTPAQV ARTVKDYVEA GLRVPKIMDY
GAMAGLRFAA ASADNVREAE DELMRLCGVP I
|
|---|
| |