Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1658 |
Symbol | |
ID | 4110493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1794620 |
End bp | 1795759 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638030778 |
Product | virulence factor MCE-like protein |
Protein accession | YP_638824 |
Protein GI | 108798627 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.415381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGGGA AGCGCTTCGC TCGCGCCGCC GCGGTGATCA TGATCGCGCT GACCGTCGCC GGGCTGTCGG GATGCGGCTT TCGCGGGTTG AACTCCTTTC GGCTGCCCGG GACGCAAGGC CAGGGGCAGG GCTCCTACAC GATTCAGGCC GAAATGCCCG ATGTCGAAAC CCTTCAGCCG AACTCACGTG TCCGCGTGGG CGACGTCAAT GTGGGCACCG TCACGAAGAT CGAGCGTCGA GGCTGGCATG CGCTGCTCAC ACTCGCACTC AACGGCGACG TCGACCTTCC CGCCAACTCG ACCGTGTCGT TGGGTCAAAC CAGCCTGCTG GGCTCACTGC ACATCGAGTT GGCACCCCCC ACCGATGTTC GTCCCGCGGG AAAACTCCGG GCCGGTTCAC TGATCCCGTT GACCTCAGCT GGGGCTTACC CGTCTACCGA ACAGACCCTG GCGTCGGTAT CCCTCCTGCT CAACGGTGGC GGAGTGGGGC AAGTACAGGA CATCACCACC GCCCTCACGT CTGCGCTGGG AGGCCGCGAA GCCGACTTCC GCAGCCTGCT TACACAATTG GACACCTTCA CCGCGAACGT CAACGGTCAA ATCGGCGACA TCATCGCGGC CACAGACAGC CTCAACAATC TGGTCGCCCA GTTCGCGGCG CAAAAGCCGA TCATCGACAA GGCCCTGGAA ACAATCCCCG ACGCGCTGGC GGTTATCAAC GCCGAACGCG ATCAGCTGGT GGAGGCGGTC GACCAGCTCG GCAAATTCAG CGCGCTGGCC GCCGACACGG TCAACCAGTC CCAAGAGTCG TTGATCCAGA TCCTGAACGA CATGGGACCG GTACTGGAAT CACTGGCTAA CGCCGGCCCG GCGCTGACCC GGTCCCTGAA CCTGTTCACC ACGATTCCGT TCGTGAAAGA CAACCTGACC AAGTGGTGGC GCGGTGACTA CGCCAACATC ACCACGATCG TGGACCTGAC TTTGAGTCGT ATCGACGCGG GGCTGTTCAC CGGTACCCGG TTCGAAGGGC ACCTCACCGA ACTGGAATTG CAGTGGGGCC GCACGATCGG GCAACTGCCC AGCCCCTACA CCGCGCGAAA CCCGTTGATC GTCCCCTACC GGCTGGATCA AGGACCGTAA
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Protein sequence | MTGKRFARAA AVIMIALTVA GLSGCGFRGL NSFRLPGTQG QGQGSYTIQA EMPDVETLQP NSRVRVGDVN VGTVTKIERR GWHALLTLAL NGDVDLPANS TVSLGQTSLL GSLHIELAPP TDVRPAGKLR AGSLIPLTSA GAYPSTEQTL ASVSLLLNGG GVGQVQDITT ALTSALGGRE ADFRSLLTQL DTFTANVNGQ IGDIIAATDS LNNLVAQFAA QKPIIDKALE TIPDALAVIN AERDQLVEAV DQLGKFSALA ADTVNQSQES LIQILNDMGP VLESLANAGP ALTRSLNLFT TIPFVKDNLT KWWRGDYANI TTIVDLTLSR IDAGLFTGTR FEGHLTELEL QWGRTIGQLP SPYTARNPLI VPYRLDQGP
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