Gene Mmcs_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1552 
Symbol 
ID4110388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1687115 
End bp1687855 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID638030673 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_638719 
Protein GI108798522 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCCA CGATGTCCAG GGTCGTCGCG ATCACCGGTG CCAGCAGCGG GATCGGTGAG 
GCGACGGCCC GGGAACTGGC CCGCCGCGGG GCCGCTGTCG TGCTGGGCGC CCGCCGCGCC
GACCACCTCG ACCGCGTCGC CGCCGAGATC CGGGAAGCGG GCGGCGCCGC CGTGGTGTGC
ACGGCCGACG TCACCCGCCT CGACGATGTC CGGCGCCTGG CCGACCGGGC GGTCGACGAG
TTCGGACGGC TCGACGTCAT GGTCAACAAC GCCGGAATCG GCAGAATCGG CCCGATCTCC
GACCTCGACG TCGACGGTTG GTCGGCCATG ATCGACGTGA ACCTGCGCGG CGTCCTGCAC
GGCATTGCCG CCGCTCTGCC GATCTTTCGC AGGCAGGGCC ACGGCCACTT CGTGACCACC
GTGTCGACCG CTGGATTGAA GATCGTTCCC GACCAGGGCG TGTACGCCGC GACGAAAAAC
GCCGTCCGCA CCGTGCTGGA AGCGCTGCGT CAGGAATCGA CCGACGGTGT CGTCCGCACC
ACGGCGATCT CACCGGGTTT CGTCAACACC AAGATGGACG GCTCGATCGA CGACCCGGTT
CTGCGTGAGC GGATTCGACG CTCCATGGAC GACGTCGGCC TGGAGCCCGA GGCTGTCGCC
CAAGCGATCG CCTTCGCCAT CGAGGCACCC GCCCATGTCG AGATCGGCGA GCTCACGATT
CGTCCCGCCG TGCAGAACTG A
 
Protein sequence
MSSTMSRVVA ITGASSGIGE ATARELARRG AAVVLGARRA DHLDRVAAEI REAGGAAVVC 
TADVTRLDDV RRLADRAVDE FGRLDVMVNN AGIGRIGPIS DLDVDGWSAM IDVNLRGVLH
GIAAALPIFR RQGHGHFVTT VSTAGLKIVP DQGVYAATKN AVRTVLEALR QESTDGVVRT
TAISPGFVNT KMDGSIDDPV LRERIRRSMD DVGLEPEAVA QAIAFAIEAP AHVEIGELTI
RPAVQN