| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1538 |
|---|
| Symbol | |
|---|
| ID | 4110374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 1673437 |
|---|
| End bp | 1674621 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638030659 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_638705 |
|---|
| Protein GI | 108798508 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.112139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAAG CCGTTCGCCA GCACGCGCGG AGCTCGGTGC GCAAGCTGCA GTTGTCCCAG
GCTGCCGCAC GCCTGTTCAC CGAACGGGGG TACCACAACG TCAGCATGGA CGATGTGGCG
TCGGCCGTCG GGCTGACCGG CCCGGCCCTG TACCGGCACT TCCGCAAGAA GCACGACATT
CTCGCCCAGG CGATCTCCGA GCAGCTGGCA TCGGTCGAAG CCGTCGCGGT GCGGGCCGTC
GAGGCGGATC TGGCACCGCC CGAGCGCTCG GCGATGTTCC TCTCCGAGCT CGCCGATCTG
GTGCTCGAAC GCGAAGAGGT GCTGCTGTGG AAGCGCGAGC GCCGCGAGTT GTCCGAAAGT
GAGCAGGACG AGTTCCGGTC GAGGCTCAAC GACGTCCTGC GGCTGACGGT GCAGGCGCTC
GGACTCGGCG ACGACGGCGA GCCGACCAGC GACGCCGAAT TGCGGGCGTG GAGCGTGCTG
GCCGTCTACT CGAGCGTCTC CCCCGCCCGC AGGGGCATGG ACGACGCTTC AGCCAAGCGA
ATACTGCAGT CGATGGCCGA TGGTGTGCTG AACTGCGAAC TGGACGCAGC GGCAACGACA
TCCAGGCCTC CCCTCGCTCC ACCGCGGCGC CCTCCGGGCC GGCGTGAGCG CATCCTCAGC
ACGGCCACTC GCCTTTTTCA CGCCCAGAGC TACCACTCGG TGGGAATCGA GGAGATCGCC
GCGGAGTCCG ATACCGCTAT CGCGACGTTC TACCAGTACT TCACCGGTAA GGCCGAGCTC
CTGCAGGCGG TGCTGAATCG GGGTGCCGAA GGTCTGCACT ATGTGACCAA TCACCGGCTG
CCGACGGCGA GCACACCGCA AGAGGCGGTC GACATCATCG CCTGCACCCT CATCGAGCTG
GCACTGGGTC CGCACCAACC GATTCTGGCG ATTCTCGCCG CCGATCTGAT CTATCTACCG
GAGAAGGCGC AGGAAGCGAT CCGGACGAGC CAGCGCGAGT ACATCGACGA ATGGGTGGTG
GCAATCAACG GCGTCCGGCC GGAGTTGTCG GCTCACCATG CCCGGCTGTT GGCCCGGGCG
TCGATCGGTC TGGTCACCGA CATCACCCAA ACCCAGAGCA TGCGCAAGCG GCCCGGCATC
GCAGGCGAGT TGCACCGCCT CGTGTCGGCG GTGCTCGCCG CTTAG
|
|---|
| Protein sequence | MAQAVRQHAR SSVRKLQLSQ AAARLFTERG YHNVSMDDVA SAVGLTGPAL YRHFRKKHDI
LAQAISEQLA SVEAVAVRAV EADLAPPERS AMFLSELADL VLEREEVLLW KRERRELSES
EQDEFRSRLN DVLRLTVQAL GLGDDGEPTS DAELRAWSVL AVYSSVSPAR RGMDDASAKR
ILQSMADGVL NCELDAAATT SRPPLAPPRR PPGRRERILS TATRLFHAQS YHSVGIEEIA
AESDTAIATF YQYFTGKAEL LQAVLNRGAE GLHYVTNHRL PTASTPQEAV DIIACTLIEL
ALGPHQPILA ILAADLIYLP EKAQEAIRTS QREYIDEWVV AINGVRPELS AHHARLLARA
SIGLVTDITQ TQSMRKRPGI AGELHRLVSA VLAA
|
|---|
| |