Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1404 |
Symbol | |
ID | 4110241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1518931 |
End bp | 1522206 |
Gene Length | 3276 bp |
Protein Length | 1091 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638030525 |
Product | UvrD/REP helicase |
Protein accession | YP_638572 |
Protein GI | 108798375 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases [COG2887] RecB family exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTGC GGTACAGTCC TGCCGAATTG GCCTCGGCGC TGGGCCTTTT CGCCCCCACC GACGAACAGG CGGCGGTCAT CGCCGCGCCG CCGGGCCCGG TCGTAGTGAT CGCCGGGGCG GGTGCGGGCA AAACCGAGAC CATGGCCGCT CGGGTGGTGT GGCTGGTCGC CAACGGCTAT GCCACACCGG GGCAGGTCCT CGGGCTGACC TTCACCCGTA AGGCGGCCGG TCAGTTGTTG CGCCGGGTGC GCACCCGGCT GGCGCGGTTG TCCGGTGCCG GGTTGGTGCC CGGCATCGGC CCGGGACTCG GAGCCGCCGA CGACCCGCCG ACGGTCAGCA CCTACCACGC GTTCGCCGGC ACGCTGCTGC GCGACCACGG TCTGCTGCTG CCGATCGAGC CGGAGACCCG GTTGCTCGGT GAGACCGAAC TGTGGCAGTG GGCCCATCGC GTGGTGTGCG AACATCCCGG CCCGCTCGAG ATAGACAAGA CGCCCGCGGC GGTCACCGAC ATGGTGCTGC GCCTCGCCGG CCAACTCGCC GAGCATTTGG TCGACACCGA CGAGTTGCGC GACACCCACG TCGAGCTCGA GCGGCTGGTG CACACCCTGC CCGCCGGGCC CTATCAGCGT GACCGCGGGC CGAGCCAGTG GCTGCTGCGG ATGCTGGCGA CGCAGACCGA GCGCACCGAA CTCATCCCGT TGGTCGACGC CCTGCACCGG CGGATGCAGT CCGAGAAGGT GATGGACTTC GGGATGCAGA TGGCCGCCGC CGCCCGGCTC GCCGCCGCCC ACCCGCAGGT CGGCGCCGAG CTGCGGGCCC GCTACCGCGT GGTGTTGCTC GACGAGTACC AGGACACCGG ACACGCCCAG CGGGTGGCGC TGTCGGCGCT GTTCGGGGGC GGTGTGGACG ACGGTCTGGC GTTGACCGCG GTCGGCGACC CGATCCAGTC GATCTACGGC TGGCGCGGTG CGTCGGCGAC CAACCTGCCC CGCTTCGCCA CCGACTTCCC CCTCTCCGAC GGCACGCCCG CCCGCGTCCT GGAGCTGCGC ACCAGTTGGC GCAATCCGCC GAGCACACTG CACCTGGCCA ACGCGGTGTC CGCTGAAGCG CGGCAGCGTT CGGTGGCGGT GCGGTCGCTG CGACCGAGGC CGGGCGCCGA GCCCGGGACC ATCCGGCTCG CACTGCTCGA CAACGTTGCC GCAGAACGTG ACTGGGTGGC CGACGAGGTG GCCAGTCGCT ACCATGCCGC GCGCGCCGAG GACGAGGCCC CGCCCACGGC GGCGGTGCTG CTGCGCCGCA ACGCCGATGC GGCACCGATG GCCGAGGCGC TCACCGCGCG GGGTGTGCCC GTCGAGGTGG TGGGTTTGGC TGGTCTGCTC GGGGTCGCCG AGGTCGCCGA CGTGGTGGCG ATGTTGCGTC TGGTGGCCGA TCCCACCGCG GGTGCGGCGG CGATGCGCAC CGTGACCGGT CCGCGGTGGC GACTCGGCGG ACGGGACATC GCGGCGCTAT GGCGGCGGGC TGTCGAACTC GACGACGGTG GACCGGGTCC GGAAGCGACG GCGGCAGAGA TCGTCGCCCG GGCCGCACCG GACGCCGATG CGGCCTGTCT GGCCGACGCG ATCTGTGATC CGGGTCCCGC CGAGAAGTAC TCACCGGAGG GCTACCGCCG CATCGTCGCG CTCGGACGCG AATTGACTTC GCTGCGTGGG CATCTCGGCA TCGCGCTACC CGACCTCGTC ACCGAGGTGC GTCGGGTGCT CGGCGTCGAC GTCGAGGCCC GTGCCGCTAT GCCGGTGCCG GCGGGTTGGT CGGGAACCGA ACACCTCGAC GCCTTCGTCG ACGTCGTCGC CGACTACGCG GGCCGGCCCG GCGCCACGGT CGGCGGGCTG CTCGCCTACC TCGACGCGGC GATGGAGCGC GAGAACGGTC TGGCGCCCGC GGATCTCGCC GTCTCCACCG AGCGGGTGCA GATCCTGACG GTGCACGCCG CCAAGGGGTT GGAATGGCAG GTGGTGGCGG TGCCGCATCT GAGCGGACGG ATCTTCCCGT CGACCGCACA GGCCCGCACG TGGCTGACCG ATCCGGCGGA TCTGCCCCCG CTGCTGCGCG GCGACCGGGC GACCACCACC GACCATGGCG TGCCGGTGCT CGACACATCG GACGTCAACG ATCGAAAGAT CCTGTCGGAC AGGATCAACG ACCACAAACG CCGCCTCGAG CAGCGTCGCG TCGACGAGGA GCGGCGGCTG TTGTACGTCG CGCTCACCCG CGCCGAGGAC ACACTGCTGC TGTCCGGACA CCACTGGGGT GCGACGGAGG CGAAACCGCG GGGCCCGTCG GAGTTCCTGG AGGAGCTCAA GGACATCATC GACCGCGCCG AGCAGGCCGG GCAGCCCTGC GGAGTGGTCG ACCAGTGGGC GCCGGCGCCG GCCGACGGTG AGAAGAACCC GTTGCGCGAC AACGTGAAAG AGGTGCTCTG GCCCGCCGAC CCGGCCGGCG GCCGGCGCAC CGCGGTCGAC CGTGGCGCGC AGTTGGTGGC CCGGGCGATG GCCGGTGCGG TGCAGACGGA TCAGGATGTC GACGGCTGGG CGGCCGATGT GGACGCGCTG CTCGCCGAAC GTGAACGGGC CGCGCAGAAG CCACCGCTGA CGCTGCCGGC CGAGGTCTCG GTGAGCACGC TGGTGAACCT CAGCGACGAC CCGGCCACGG TGCTGTCCCG CATCAACCGC CGGGTGCCCA CCCGCCCCGA CCCGAATGCC TCGCTGGGCA CGGCTTTTCA CGACTGGGTG CAGCGCTACT TCGGGGCCGA GCGGTTGTTC GACCTCGACG ATCTGCCCGG GGCCGTCGAC AGCGACACCA GGCGCGCCGA AGCCGAACAG CTCACCGAAC TGCAGACGGC GTTCATGTTG TCCCCGTGGG CCGCCCGCAC ACCGATCGAC GTCGAGGTGC CGTTCGACAT GGTCATCGGG GAGACGATGG TGCGGGGCCG CATCGACGCG GTGTTCGCCG ACGACGACGG CGGCGCCACC ATCGTCGACT GGAAGACCGG GGCGGCACCG GACACACCGG CGGCCGCTGA GCACGCCGCG ATTCAGCTCG CCGTCTACCG GCTGGCGTGG GCGCAACTGA GCGGATGCCC GGTGGAGCGG GTGCGGGCGG CGTTCCACTA CGTCCGCCCG AACCAGACGC TGCGCCCGGC CGGCCTACCG GATGTGGAGG ATCTCGCGGC GCTGCTGGCG GCGGCGCGGG AACCGGCGGG TCAGGAGGTG CGGTAG
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Protein sequence | MTVRYSPAEL ASALGLFAPT DEQAAVIAAP PGPVVVIAGA GAGKTETMAA RVVWLVANGY ATPGQVLGLT FTRKAAGQLL RRVRTRLARL SGAGLVPGIG PGLGAADDPP TVSTYHAFAG TLLRDHGLLL PIEPETRLLG ETELWQWAHR VVCEHPGPLE IDKTPAAVTD MVLRLAGQLA EHLVDTDELR DTHVELERLV HTLPAGPYQR DRGPSQWLLR MLATQTERTE LIPLVDALHR RMQSEKVMDF GMQMAAAARL AAAHPQVGAE LRARYRVVLL DEYQDTGHAQ RVALSALFGG GVDDGLALTA VGDPIQSIYG WRGASATNLP RFATDFPLSD GTPARVLELR TSWRNPPSTL HLANAVSAEA RQRSVAVRSL RPRPGAEPGT IRLALLDNVA AERDWVADEV ASRYHAARAE DEAPPTAAVL LRRNADAAPM AEALTARGVP VEVVGLAGLL GVAEVADVVA MLRLVADPTA GAAAMRTVTG PRWRLGGRDI AALWRRAVEL DDGGPGPEAT AAEIVARAAP DADAACLADA ICDPGPAEKY SPEGYRRIVA LGRELTSLRG HLGIALPDLV TEVRRVLGVD VEARAAMPVP AGWSGTEHLD AFVDVVADYA GRPGATVGGL LAYLDAAMER ENGLAPADLA VSTERVQILT VHAAKGLEWQ VVAVPHLSGR IFPSTAQART WLTDPADLPP LLRGDRATTT DHGVPVLDTS DVNDRKILSD RINDHKRRLE QRRVDEERRL LYVALTRAED TLLLSGHHWG ATEAKPRGPS EFLEELKDII DRAEQAGQPC GVVDQWAPAP ADGEKNPLRD NVKEVLWPAD PAGGRRTAVD RGAQLVARAM AGAVQTDQDV DGWAADVDAL LAERERAAQK PPLTLPAEVS VSTLVNLSDD PATVLSRINR RVPTRPDPNA SLGTAFHDWV QRYFGAERLF DLDDLPGAVD SDTRRAEAEQ LTELQTAFML SPWAARTPID VEVPFDMVIG ETMVRGRIDA VFADDDGGAT IVDWKTGAAP DTPAAAEHAA IQLAVYRLAW AQLSGCPVER VRAAFHYVRP NQTLRPAGLP DVEDLAALLA AAREPAGQEV R
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