Gene Mmcs_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1397 
Symbol 
ID4110234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp1510462 
End bp1511136 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID638030518 
ProductTetR family transcriptional regulator 
Protein accessionYP_638565 
Protein GI108798368 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.515474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATC TCGCCAACAC CGCTGAGAGG AGTGGCGACA AGCCTGCCAG CAGCACCGGG 
CTGCCGAAGA ACAACCGGCG CGGCAATCGA CTCCCACGCG ACGAGCGTCG CGGGCAGTTA 
CTGATCGCCG CCAGTGAGGT TTTCGTCGAC CGGGGCTACC ACGCCGCCGG CATGGACGAG 
ATCGCCGACC GCGCCGGTGT CAGCAAACCG GTTCTGTACC AACACTTCTC ATCGAAGCTC 
GAACTGTATC TCGCGGTGCT GCAACGCCAC GTCGACAACA TGGTCTCCGG CGTGCGTCAG 
GCGCTGCGCA CCACCACCGA CAACCGGCAA CGGTTGCGCG CGGCCGTCCA GGCGTTCTTC 
GACTTCATCG AACACGACAG CCAGGGCTAC CGGCTGATCT TCGAGAACGA CTACACCACC 
GAACCGCAGG TGGCCGCACA GGTGAAGGTC GCGACCGAGG CCTGCACCGA TGCGGTGTTC 
GACCTGATCA GCCGGGACTC CGGCCTGGAG GCCCACCGGG CCAGGATGAT CGCGGTGGGC 
CTCGTGGCCA TCAGCGTGGA CTGCGCCCGC TACTGGCTCG ATGCCGATCG GCCGATCTCA 
AAGGACGATG CGGTCGACGG CACGGTGCAC TTCGCCTGGG GCGGGCTGTC CCACGTGCCG 
CTCACCCGTT CTTGA
 
Protein sequence
MSDLANTAER SGDKPASSTG LPKNNRRGNR LPRDERRGQL LIAASEVFVD RGYHAAGMDE 
IADRAGVSKP VLYQHFSSKL ELYLAVLQRH VDNMVSGVRQ ALRTTTDNRQ RLRAAVQAFF 
DFIEHDSQGY RLIFENDYTT EPQVAAQVKV ATEACTDAVF DLISRDSGLE AHRARMIAVG 
LVAISVDCAR YWLDADRPIS KDDAVDGTVH FAWGGLSHVP LTRS