| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1379 |
|---|
| Symbol | |
|---|
| ID | 4110216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 1495544 |
|---|
| End bp | 1496257 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638030500 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_638547 |
|---|
| Protein GI | 108798350 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAACGG CCTGCCTGGA TCGTCCGGTG GATCTGCCGG GCCTGTTCGA CGGCGCCGCG
ACAGAAGGGA CGGTGTCGAC CACGATGACC GACATCGACG GTGCGGCGGC CGAACGACAG
GAAACCGACG CCGAACTGAC CGCGCGTTTC GAGCGCGATG CGATACCGCT GCTCGACCAG
CTCTACGGCG GCGCGCTGCG CATGACGCGC AATCCCGCCG ACGCCGAGGA TCTGCTGCAG
GAGACGATGG TCAAGGCCTA TGCCGGGTTC CGGTCGTTCC GCGAGGGCAC CAACCTCAAG
GCGTGGCTAT ACCGCATCCT GACCAACACC TACATCAACA GCTACCGCAA GAAGCAGCGC
CAGCCGTCGG AGTACCCCAC CGAGGAGATC ACGGACTGGC AGCTCGCCGC GAACGCCGAG
CATTCGTCGA CGGGGCTGCG GTCTGCCGAG GTCGAGGCGC TCGAATCGCT GCCCGACACG
GAGATCAAGG CGGCGTTGCA GGCGCTGCCG GAGGATTTCC GGATGGCGGT GTACTACGCC
GACGTCGAAG GATTCCCGTA CAAGGAGATC GCGGAGATCA TGGATACGCC CATCGGGACC
GTGATGTCCC GGTTGCATCG TGGCCGCAAG CAGCTCCGTG AGCTGCTCGC CGATGTCGCC
CGAGACCGCG GGTTCCTCCG CGGTGCGCAA GCGCCCGAGG AGGTGTCGTC GTGA
|
|---|
| Protein sequence | MPTACLDRPV DLPGLFDGAA TEGTVSTTMT DIDGAAAERQ ETDAELTARF ERDAIPLLDQ
LYGGALRMTR NPADAEDLLQ ETMVKAYAGF RSFREGTNLK AWLYRILTNT YINSYRKKQR
QPSEYPTEEI TDWQLAANAE HSSTGLRSAE VEALESLPDT EIKAALQALP EDFRMAVYYA
DVEGFPYKEI AEIMDTPIGT VMSRLHRGRK QLRELLADVA RDRGFLRGAQ APEEVSS
|
|---|
| |