Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1356 |
Symbol | |
ID | 4110193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1469751 |
End bp | 1471499 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638030477 |
Product | choline/carnitine/betaine transport |
Protein accession | YP_638524 |
Protein GI | 108798327 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.379286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTCA GTTCAGAGAA GGACAACGAG AAACACCGCC GACGCCGCGT CGAGGCAATC AGGTCGCCGA CCGACGAGGC GATCCCGCAT CCCATCCTCG ACATCCCGGT CGACGAGGAG GCCTACACCG GCTACCGGGG TCTCGACTGG GTGGTCTTCG GCGTCACCGC CGTCATCGCG GTGGCATTCC TGGCCTGGGG GTTCGTCAGC ACCGAGTCGC TGGCCACGGC GTCGGGGAAC GCCCTGACCT GGGTGATGGA CAACACCGGG TGGCTGTTCG TGCTCACCGC GTCGGGATTC GTGGTCTTCG TGCTGTGGCT GGCGCTCGGC CGCTACGGCA ACATCCCGCT CGGCCGTGAC GACGAGGAAC CCGAGTTCCG CAGCGTCTCG TGGGTCGCGA TGATGTTCAG CGCAGGCATG GGCATCGGGC TGATGTTCTT CGGTGTGGCC GAGCCGCTGA CCCACTTCGC CACCCCGCCG CCGGGCGTCG TGCCACAGGG CGGTGCCGAG GCCGGTGCCG AGGCCGTCGA GTCCGCGATG GCCACCACGC TGTTCCACTG GACCCTCCAT CCGTGGGCGA TCTACGCCGT CGTCGGGCTG GCCATCGCCT ACGGCGTCTA CCGCAAGGGC CGGCTGCAAC TGATCAGCGC GGCGTTCGAA CCCCTGATCG GATCCCGGGC CAACGGGCCG TGGGGCAAGG TGATCGACAT GCTGGCGATC TTCGCCACGC TGTTCGGGTC GGCGGCCTCA CTGGGCTTGG GCGCGTTGCA GATCCGCAGC GGCCTGCAGA TCGTCGGCGG CATCGGCGAG ACCGGCAACA CGATCCTCAT CGTCATCATC ACCGCCCTGA CGGTCGCGTT CGTGCTGTCG GCCGTCTCGG GGGTGGCGCG GGGCATTCAG TGGCTGTCGA ACATCAACAT GGTGCTCGCC CTGCTGCTGG CGTTGTTCAT CTTCGTCGTC GGCCCGACGG TGTTCATCCT CAATCTGTTG CCGACCTCGA TGGGCAGCTA CCTCGCCGAC CTGGCGATGA TGTCGGCCCG CACCGGCGCC GAGGGTCCCG ACGTCGACAC CTGGCTGCAG TCGTGGACGA TCTTCTACTG GGCCTGGTGG ATCTCGTGGA CCCCGTTCGT CGGCATGTTC ATCGCCCGCA TCTCGCGCGG ACGCACCATC CGGCAGTTCG TCACCGGTGT GCTGCTGGTG CCGAGCCTGG TGTCGCTGGT GTGGTTCTGC ATCCTCGGCG GCGCGGCCAT CGACACCCAG CAGGGCGGGG TGGATCTGGC CGGTGAGGGC AGCAACGAGG AGCAGTTGTT CACCCTGCTC GCCCAGTACC CGATCGCGAC CGTGGCCAGC ATCGTGGTGA TGGTGCTGGT GGCGATCTTC TTCGTCTCCG GCGCCGACGC CGCGTCGATC GTCATGGGCT CGCTGTCCGA GCGCGGCACG ATCAAACCCA CCCGGGGTGT GGTGATCTTC TGGGGCGTCA CGACGGGCGC GGTGGCGGCG GTGATGCTGC TGGTCGGCGG CGCGGACGCG CTGACCGGTC TGCAGACCAT CACGATCATC GCCGCGCTGC CCTTCGTCCT CGTCATGGTG GGGCTGGCGG TGGCGCTGGT CAAAGACCTG CGCAACGATC CGCTGGTGGT GCGGAAGAAG TACGCCGCGG AGGCGGTGGA CAGTGCGGTC ATCCACGGCG TCATCGAACA CGGCGACGAC TTCATCATCT CGGTGGAGAA GGATCCCGAC GCCAGGTAG
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Protein sequence | MTVSSEKDNE KHRRRRVEAI RSPTDEAIPH PILDIPVDEE AYTGYRGLDW VVFGVTAVIA VAFLAWGFVS TESLATASGN ALTWVMDNTG WLFVLTASGF VVFVLWLALG RYGNIPLGRD DEEPEFRSVS WVAMMFSAGM GIGLMFFGVA EPLTHFATPP PGVVPQGGAE AGAEAVESAM ATTLFHWTLH PWAIYAVVGL AIAYGVYRKG RLQLISAAFE PLIGSRANGP WGKVIDMLAI FATLFGSAAS LGLGALQIRS GLQIVGGIGE TGNTILIVII TALTVAFVLS AVSGVARGIQ WLSNINMVLA LLLALFIFVV GPTVFILNLL PTSMGSYLAD LAMMSARTGA EGPDVDTWLQ SWTIFYWAWW ISWTPFVGMF IARISRGRTI RQFVTGVLLV PSLVSLVWFC ILGGAAIDTQ QGGVDLAGEG SNEEQLFTLL AQYPIATVAS IVVMVLVAIF FVSGADAASI VMGSLSERGT IKPTRGVVIF WGVTTGAVAA VMLLVGGADA LTGLQTITII AALPFVLVMV GLAVALVKDL RNDPLVVRKK YAAEAVDSAV IHGVIEHGDD FIISVEKDPD AR
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