Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1352 |
Symbol | |
ID | 4110189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1463897 |
End bp | 1464577 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638030473 |
Product | sigma 54 modulation protein/ribosomal protein S30EA |
Protein accession | YP_638520 |
Protein GI | 108798323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0211807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACGC ATTCCACCGA AACCGACCGC ACGATGGTGA TCGAGGGCGA GCCCCCCGCG GAGGCGCCCA ACGCCGAGGT GGTGGTCAAG GGCCGCAACG TCGAGATTCC CGATCACTTC CGAACCTACG TCGCCGAGAA GCTCACGCGG CTGGAACGGT TCGACCGCAC CATCTACCTC TTCGACGTCG AGCTCGACCA CGAAAAGAAC CGTCGCCAGC GCAAGAACTG CCAGCACGTG GAGATCACGG CGCGCGGACG TGGTCCCGTG GTCCGGGGTG AGGCCTGCGC GGACAGTTTC TACGCCGCCT TCGAGGCGGC GGTGAGCAAA CTCGAGAACC GGCTGCGCCG CAGCAAAGAC CGCCGCAAGA TCCACTACGG GGACAAGCGG CCGGTGTCGG TGGCCGAGGC CACCGCGGCG ACAGCGGCGA TCGAACAGGA GACCCCGGCG CCCGCCGAGG ACACCGGCCT GCCCGACGGC CTCACGCTGG ACGATCACGA ACCGGGGCGC ATCGTCCGCG TCAAGGACCA TCCCGCCACG CCGATGACCG TGGACGATGC GCTGTCGCAG ATGGAACTCG TCGGCCACGA CTTCTTCCTC TTCCACGACA AGGAGACCGA CAAGGCCACC GTCGTGTACC GCAGGCACGC CTACGACTAC GGGTTGATCC GACTGGCCTG A
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Protein sequence | MSTHSTETDR TMVIEGEPPA EAPNAEVVVK GRNVEIPDHF RTYVAEKLTR LERFDRTIYL FDVELDHEKN RRQRKNCQHV EITARGRGPV VRGEACADSF YAAFEAAVSK LENRLRRSKD RRKIHYGDKR PVSVAEATAA TAAIEQETPA PAEDTGLPDG LTLDDHEPGR IVRVKDHPAT PMTVDDALSQ MELVGHDFFL FHDKETDKAT VVYRRHAYDY GLIRLA
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