| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1255 |
|---|
| Symbol | |
|---|
| ID | 4110092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 1358242 |
|---|
| End bp | 1359231 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638030376 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_638423 |
|---|
| Protein GI | 108798226 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCACC GTAATGCCCC GTTGTCCGAA ACCGGTCGTC TGAGGCTGGC TCGCTGCGTC
GTTGAGGAGG GCTGGCCGCT GCGCCGGGCT GCTGAGCGGT ACCAGGTCGC TGTGACCACT
GCGGCCCGGT GGGCCAGCCG ATACCGGGAG CTGGGTCCAG CCGGCATGGT CGATCGCAGC
TCCCGGCCGC ACCGCAGTCC CAATCAGACG CCGACTCGCA CCGAACGGCG GATCATCAAA
GTCCGGGTAC TGCGCCGGTG GGGACCTGCT CGGATCGGCT ATCTGTTGGG CATTCATCCC
TCCACTGTCC ATCGGGTCCT GACCCGCTAC GGGCTGGCCA AACTGTGCTG GTTAGACCGA
CCCACTGGCC GGGTTGTCCG ACGCATCGAA ACCTCCCGGT GCGGGGAGCT GGTGCATGTC
GATGTCAAGA AACTCGGCAA GATCCCCGCC GGTGGCGGCT GGCGAATGTT GGGCCGCACG
ATCGGCAACC GCAACTCCAA GGCCGATACG AGCTCGGGGC GTCGCAACAA GTACCGGACC
CCGCTGCGCG GTCACCATTT TCTGCACACC GCGATCGACG CCCACTCGCG GTTGGCCTAC
TCCGAACTCC TGGCCGATGA ACGCAAAGAG ACCTCGGCGG GGTTCTGGTT ACGGGCCAAC
GCCTGGTTCG CTGAGTGTGG CATCACTGTG CGGAAAGTGT TGACCGACAA TGGCTCCTGC
TACCGATCCC ACGCCTTCCG CGACGCACTT GGCGGCATCG AGCACCGGCG CACCCGCCCG
TACCGGCCGC AGACCAACGG CAAGGTGGAG AGATTTCACC GCACCCTGGC CGATGAATGG
GCCTACGTCC GGCTCTACAC CAGCGACTCC GAACGCTGCG AGCAGTTCCC GATCTGGCTG
CACACCTACA ATCACCACCG CGGCCACACC GCACTCGGCG GTCAACCACC CGCCAGCCGC
GTACCTAACC TGTCAGGTCA GTACAGCTAG
|
|---|
| Protein sequence | MSHRNAPLSE TGRLRLARCV VEEGWPLRRA AERYQVAVTT AARWASRYRE LGPAGMVDRS
SRPHRSPNQT PTRTERRIIK VRVLRRWGPA RIGYLLGIHP STVHRVLTRY GLAKLCWLDR
PTGRVVRRIE TSRCGELVHV DVKKLGKIPA GGGWRMLGRT IGNRNSKADT SSGRRNKYRT
PLRGHHFLHT AIDAHSRLAY SELLADERKE TSAGFWLRAN AWFAECGITV RKVLTDNGSC
YRSHAFRDAL GGIEHRRTRP YRPQTNGKVE RFHRTLADEW AYVRLYTSDS ERCEQFPIWL
HTYNHHRGHT ALGGQPPASR VPNLSGQYS
|
|---|
| |