Gene Mmcs_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1239 
Symbol 
ID4110076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1341640 
End bp1342728 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content76% 
IMG OID638030360 
ProductNLP/P60 
Protein accessionYP_638407 
Protein GI108798210 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00968494 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAGCA CGCTGGTGGA AGCGCTCTCC GCACCGCTGC GCGAGGTGCG CTCGCTCGTC 
GGGCCGGGGT GGCCGGACGG TTCCGGCGGC GCGCCTGCCG CCGCGCTGGC CGCGGTGCGG
GACGCGCTGG GCGGGGTGTC GACCGCGACG CAGGCAGCGT GGCAGCGCAC CACGGACGGC
TGGTCGGGCA GCGGCGCCGA CAGTGCGGGG GCGTTCGCCG CGGCCACCAC CGCAGCGGTC
ACCGGGTTGG CCGACCGGAC GGGCCGGCTG ACCGCGGGCA CCCGCGAAGC AGGCGCCGCA
GTCGCCCGCG CCGCCGCGCG CCTGCAGGAC ATCGTCGAAC GCTTCGAAAC CCGGGCGGCC
GCGCTCGAAT CCCAGCTGGA CACCCCGGGC GTCGCCGAGG AACTGCTCAC CGAGGCCCGG
CGCGCCCTGC GCGAGGCCAT CGGCATCGTC GAGGAGTTGC GCGCCGAACT CGACAGCCAC
GCCGATGCGC TCACCTCACC CGGTGGGGCG CCGGGAGCCG CGCCTGCGCC CACCGTTCCG
GCCGGCTTCG GCGGGGGCGC GCCCGGTGCG CTCGGCGGCG CCACCCCGAC GGCGTCCCTG
GCGTCCCTGG CTTCCCGGAC TTCGAAGGGC CCGCCGGCCG AGGCGGCCTC GCGCCGCGGG
GCGGCAGCCC AGCCCGATCC TGGGGTGTTC GGCGACGGTG TGGCGGTGCG GTTGCCCGAC
GGCAGTACGG CCACCGCGCC GAACCCGGTC GCCGCCGAGG CGGTGCGCCA CGCGCTGACC
CAGTTGGGGG TGCCGTACCA GTGGGGCGGC ACCACCCCGG GTGTCGGACT GGACTGCAGC
GGCCTGACGC AGTGGGCCTA CCGCGAGGCC GGTTTGGACC TGCCCCGGTT GGCGCAGGAG
CAGGATGTCG GCGCCGCCGT CGACGCCGGT TCGCTGCGGC CCGGTGACCT CGCGGTGTGG
GACGGACACG TCGCGATGAT CGTCGGCGAC GGCGTCATGG TCGAGGCGGG TGATCCGGTC
AAACTCTCGC CGATCCGGAC GAGCAATGCC GGACAGGGAT TTCAGGGTTT CTGGCGTCCG
ACGGCGTGA
 
Protein sequence
MPSTLVEALS APLREVRSLV GPGWPDGSGG APAAALAAVR DALGGVSTAT QAAWQRTTDG 
WSGSGADSAG AFAAATTAAV TGLADRTGRL TAGTREAGAA VARAAARLQD IVERFETRAA
ALESQLDTPG VAEELLTEAR RALREAIGIV EELRAELDSH ADALTSPGGA PGAAPAPTVP
AGFGGGAPGA LGGATPTASL ASLASRTSKG PPAEAASRRG AAAQPDPGVF GDGVAVRLPD
GSTATAPNPV AAEAVRHALT QLGVPYQWGG TTPGVGLDCS GLTQWAYREA GLDLPRLAQE
QDVGAAVDAG SLRPGDLAVW DGHVAMIVGD GVMVEAGDPV KLSPIRTSNA GQGFQGFWRP
TA