| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1232 |
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| Symbol | deoA |
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| ID | 4110069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 1330080 |
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| End bp | 1331426 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638030353 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_638400 |
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| Protein GI | 108798203 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.32576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGACT TCACTTTCGA CGCGCCCCGG CCGATGTCGC ATCTCGATGC TCCGACCGTC
ATCCGGGTCA AACGCGACGG CGGCGACCTG CCCGACGAGG CGATCGACTG GGTGATCGAC
GCGTACACCC GCGGGCAGGT GGCCGACGAG CAGATGTCGG CCCTGCTGAT GGCGATCTTC
CTGCGCGGGA TGACCGGCCC CGAGATCGCG CGCTGGACAG CGGCGATGGT GGCATCGGGG
CAGCGGTTCG ACTTCACCGA TCTGCGACGC GGCGGCCGTC CGCTGGCGCT GGTCGACAAA
CACTCCACCG GCGGGGTCGG CGACAAGATC ACCATCCCGC TGGTGCCTGT CGTGATGGCC
TGCGGCGGCG CGGTGCCCCA GGCCGCCGGA CGCGGGCTCG GCCACACCGG CGGCACCCTC
GACAAACTCG AAGCCATCCC CGGATTCACC GCCGAACTGA CCAAAAGCCA GATCCGCCAA
CAACTCAGCG AGATCGGTGC GGCGATCTTC GCCGCGGGTG AGCTGGCCCC GGCCGACCGC
AAGATCTATG CGCTGCGCGA CGTCACCGCC ACCACCGAAT CGCTGCCGCT GATCGCCAGC
TCGGTGATGA GCAAGAAGAT CGCCGAGGGC GCCCGCGCGC TGGTGCTCGA CACGAAGGTC
GGTTCGGGCG CCTTCCTGCC CACCGAGGCC GAGGCCCGCG AACTGGCCCG CACGATGGTC
GAGTTGGGTC ACGCGCACGG TCTGGTGACG CGCGCCCTGC TGACCGACAT GTCGGTGCCG
CTGGGCCGCG CCGTCGGCAA CGCGGTCGAG GTCGTCGAAT CGCTGGAGGT GCTCGCCGGC
GGCGGGCCCG ACGACGTGGT GGAACTGACG CTGGCGTTGG CGGCCGAGAT GCTCGACGCC
GCCGGGATCG ACGGGACCGA CCCCGCCGAG ACGCTGCGCG ACGGTACCGC CATGGACTGT
TTCCGCGCGC TCGTCGCGGC CCAGGGCGGC GACACCTCCC GATTGGCCGC CGACGCGTTG
CCCATCGGTG TCCACACCGA CACCGTCACG GCACCGCGCG GTGGCACCAT GGGTGACATC
GACGCGATGG CGGTGGGTCT GGCGGTGTGG CGGCTCGGAG CGGGCCGCTC GGCGCCCGGT
GAGCAGGTGC AGTTCGGCGC CGGTCTCCGC ATCCACCGCC GTCCCGGTGA GCCGGTGAGT
GCGGGCGAGC CGCTGTTCAC CCTCTACACC GACACCCCCG ACCGGCTCGG GCCGGCCCGA
GCCGAACTCG AGGGTGCCTG GACGGTGGGG GACAGTGCCC CGCCGGCGCG TCCGCTGATC
ATCGACCGGA TCACCGCGAC AGGCTGA
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| Protein sequence | MTDFTFDAPR PMSHLDAPTV IRVKRDGGDL PDEAIDWVID AYTRGQVADE QMSALLMAIF
LRGMTGPEIA RWTAAMVASG QRFDFTDLRR GGRPLALVDK HSTGGVGDKI TIPLVPVVMA
CGGAVPQAAG RGLGHTGGTL DKLEAIPGFT AELTKSQIRQ QLSEIGAAIF AAGELAPADR
KIYALRDVTA TTESLPLIAS SVMSKKIAEG ARALVLDTKV GSGAFLPTEA EARELARTMV
ELGHAHGLVT RALLTDMSVP LGRAVGNAVE VVESLEVLAG GGPDDVVELT LALAAEMLDA
AGIDGTDPAE TLRDGTAMDC FRALVAAQGG DTSRLAADAL PIGVHTDTVT APRGGTMGDI
DAMAVGLAVW RLGAGRSAPG EQVQFGAGLR IHRRPGEPVS AGEPLFTLYT DTPDRLGPAR
AELEGAWTVG DSAPPARPLI IDRITATG
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