Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1223 |
Symbol | |
ID | 4110060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1322613 |
End bp | 1323536 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638030344 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_638391 |
Protein GI | 108798194 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCGA GTGCGCGGAT CGACGAGTTC GAGAGCCTGC GACCGTATCT GCTGTCGGTG GGCTACCGCC TGACGGGTTC GGTGGCCGAT GCCGAAGACG CCGTGCAGGA TGCCTGGCTG CGGTGGGATG CGCTGGGGGA GGACTGGTCC GGCATCGCCG ATCTGCGCGC GTGGCTGACG ACGGTGGTCA GCCGCATCGG CCTCGACCGG TTGCGGTCGG CCGCCCGGCG GCGGGAGACC TACGTCGGCG AATGGCTGCC CGAACCCGTC GTCACGGGAT TGGACCGCAC CGATCCGTTG TCGGCGGTGG TCGCCGCCGA GGACGCCCGG TTCGCGGCGA TGGTGGTGCT CGACCGGTTG ACGCCCGACC AGCGGGTGGC GTTCGTCCTG CACGACGGCT TCGCGGTGTC GTTCACCGAG ATCGCCGGCG TCCTCGGGGT GAACCCCGCC GCGGCCCGTC AACTCGCGTC GCGGGCCCGC CGGGCCGTCG CCGATGCCGA GGCACCCGCC CGCGACCCGT CCCACGACGA GGTCGTGGGC CGGCTGATGG CGGCGATGGC AGCGGGTGAC ATGGCCGCCG TCGTTGAACT GCTGCACCCC GACGTCACCT TCACCGGAGA CTCGAACCGT AAGGCGCCCA CCGCTCCTCG CGTCATCCAC GGCGCCGACA AGGTGGCCAG GTTCGTCTTC GGGCTGGCCC GTCGCTACGG GCCGCGGTTC TTCGAGGCGG GCGAGCTCGC ACTCGTCAAC GGCGACCTCG GCCTCTGCAC CGCGGGCCTG CCCGCCGACG GTGAGTGGCC CGCGATGGCG CCGCGCATCC AGGCGCTGAC CGTGCGCGAC GGCAAGGTGT GCGCGATCTG GGACGTCGCC AACCCGGACA AGTTCACGGC TTCGCCCATG GCACCCGGCA GGCGTCGGTA CTGA
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Protein sequence | MTASARIDEF ESLRPYLLSV GYRLTGSVAD AEDAVQDAWL RWDALGEDWS GIADLRAWLT TVVSRIGLDR LRSAARRRET YVGEWLPEPV VTGLDRTDPL SAVVAAEDAR FAAMVVLDRL TPDQRVAFVL HDGFAVSFTE IAGVLGVNPA AARQLASRAR RAVADAEAPA RDPSHDEVVG RLMAAMAAGD MAAVVELLHP DVTFTGDSNR KAPTAPRVIH GADKVARFVF GLARRYGPRF FEAGELALVN GDLGLCTAGL PADGEWPAMA PRIQALTVRD GKVCAIWDVA NPDKFTASPM APGRRRY
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